Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03805 ATGAAAGCGTTCGCAATATCGTCATCATTAGCATTCAAGTCTTTCAACTTCACCCACACTCGAAACCGAATCTCCACTCCCTTTCACTCCAACACTCTCCCCTTTCTACCTCCCATTCCCAACCGCAAAATCCACTCTTCCTCTCCAATCATGGCTTCTTCTATACCACCATCCATCAACTCAGAACTAGCACGTTCCCCACCCGCAATCCCCATGCCCGCTCCCCCTCTCACCAAGTTCAACATTGGTCTCTGTCAACTCTCAGTAACCTCCGACAAAGACCGAAACATCGCTCACGCTAGGACTGCCATTCAAGACGCTGCCGCAAAAGGGGCGAAACTTGTTCTCTTACCTGAGATTTGGAATAGTCCTTATGCGAATGACAGTTTTCCTGTTTATGCTGAGGATATTGATGCCGGTGGTCATGCTTCTCCTTCTACTGCTATGTTGTCTGAACTCGCCAGGTTGTTGAAGATTACTATTGTTGGTGGCTCTATTCCTGAACGTTCCGGAGATCGCGTGTATAATACTTGCTGTGTTTTTGGTACTGATGGAAAACTCTTGGCAAAGCACCGGAAGATACATCTTTTTGATATTGACATCCCTGGGAAGATTACCTTTATTGAATCATTGACTCTCACTGCCGGGGAGACTCCAACAATTGTTGACACAGAGGTTGGACGCATTGGCATAGGCATTTGTTATGACATTAGGTTTCCGGAACTAGCAATGATATATGCAGCAAGAGGTGCACACTTGCTCTGCTATCCAGGGGCTTTTAACATGACAACTGGACCATTGCATTGGGAGTTATTGCAGAGATCAAGGGCTACAGATAATCAGCTATATGTGGCAACCTGTTCACCTGCTCGGGATAATGGACCTGGTTACGTGGCTTGGGGTCACTCCACTCTTGTTGGTCCCTTTGGAGAAGTTCTGGCTACTACAGAACACGAGGAGGCAATCATTATAGCAGAAATTGATTATTCAATATTGGAGCAGAGAAGGACAAATCTCCCTGTGACTAAGCAACGAAGGGGTGATCTTTACCAGTTGGTAGATTTGCAGAGGCTGAATTCCCACTGA 1086 0.4632 MKAFAISSSLAFKSFNFTHTRNRISTPFHSNTLPFLPPIPNRKIHSSSPIMASSIPPSINSELARSPPAIPMPAPPLTKFNIGLCQLSVTSDKDRNIAHARTAIQDAAAKGAKLVLLPEIWNSPYANDSFPVYAEDIDAGGHASPSTAMLSELARLLKITIVGGSIPERSGDRVYNTCCVFGTDGKLLAKHRKIHLFDIDIPGKITFIESLTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRSRATDNQLYVATCSPARDNGPGYVAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSILEQRRTNLPVTKQRRGDLYQLVDLQRLNSH 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03805 361 ProSitePatterns Uncharacterized protein family UPF0012 signature. 230 250 IPR001110 -
Vifa2g03805 361 CDD nit 82 346 IPR045254 GO:0016811
Vifa2g03805 361 FunFam Omega-amidase chloroplastic 77 355 - -
Vifa2g03805 361 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 80 329 IPR003010 GO:0006807
Vifa2g03805 361 Pfam Carbon-nitrogen hydrolase 82 332 IPR003010 GO:0006807
Vifa2g03805 361 PANTHER NITRILASE-RELATED 62 353 - -
Vifa2g03805 361 SUPERFAMILY Carbon-nitrogen hydrolase 79 353 IPR036526 -
Vifa2g03805 361 Gene3D - 78 355 IPR036526 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03805 K13566 - gmx:100817195 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03805 2 1113974670 1113979219 Vifa2g03805 2 1113974670 1113979219 ECH