Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03797 ATGGAAAAGATAGAAGAAATGATGCAACTACCGTACAACACGACGGTGAAGCTGATGCTCGGTTCACTGGAACGCAACCTGCTTCCTGACGCCGTCATCAGAAGGCTCTCACGCTTGCTTTTGGCCACTCGCCTTCGATCTTCTTACAAGCCTTCTTCTGAACTTCAGCTCTCTGATCTTCTCCAATTCGCACATTCTTTACTAGAGATGCCGATTGCAGTTAGTACTGATAAGCCTAAATCTCAACACTATGAACTACCAACCTCTTTCTTTAAGCTCGTTCTCGGAAACAATCTCAAATACAGTTCTTGTTATTTCTCTTCGGCCTCCAAGACATTGGAAGATGCTGAAGAAGAAATGTTGAAACTGTATTGCGAGAGATCAAATCTGAAAGATGGTCATACAGTTCTCGACGTTGGATGCGGTTGGGGTTCTCTTACTCTATACATTGCCAAGAATTACAGTAATTCTAGGGTTACAGGAATCTGCAATTCCACTACTCAAAAAGATTTTATCGAGGAGAAATGCGTAGAGCTGCAGCTGCAAAATGTGGATATCATCGTTGCGGATATTAGCACATTTGAAATGGAAGCTTCTTATGACAGAATATTTTCCATAGAAATGTTTGAGCATATGAAGAACTATAAAGATCTTCTAAACAAGATATCCAAATGGATGAAAGAGGATGGCCTTTTATTTGTTCATCATTTCTGCCACAAAGTGTTTGCCTACCACTTTGAGGACAACAATGAAGATGATTGGATTACGCGATACTTCTTTACTGGAGGAACTATGCCTGCAGCAAATCTACTTCTTTATTTTCAAGAGGATGTTACTGTGGTCAACCATTGGCTGGTAAATGGGAAACACTACGCACAGACCAGTGAAGAGTGGCTCAAAAGAATGGATAAGAACATGACTTCAATCAAGCCAATTATGGAATCAACATATGGCAAAGATTCGGCTACTAAGTGGACTGTCTACTGGAGAACATTTTTCATAGCTGTAGCAGAACTTTTTGGATACAATAATGAATCAAAATATGACTCTGAGTTAGAATCAGATGACGGCTTTGAAGATTTTGAAGATGAGTCAGAATCTGAGGTTTCTGAAGGCGAGTTAGAGTCAGAAGATGACTCTGAAGCTGAAGACAAGTCAGAATCCGAAGGTGATTCTGAGTCTGAAGAAGATTTTGCTTCTGAAGAAGAGTCAGAAGATGATGACTCTGGAAACTCTGAAGGTGAGTCAGATGGTGAATCTGATTCTGATCCAGATTTTGATGATGATCCATAA 1293 0.4022 MEKIEEMMQLPYNTTVKLMLGSLERNLLPDAVIRRLSRLLLATRLRSSYKPSSELQLSDLLQFAHSLLEMPIAVSTDKPKSQHYELPTSFFKLVLGNNLKYSSCYFSSASKTLEDAEEEMLKLYCERSNLKDGHTVLDVGCGWGSLTLYIAKNYSNSRVTGICNSTTQKDFIEEKCVELQLQNVDIIVADISTFEMEASYDRIFSIEMFEHMKNYKDLLNKISKWMKEDGLLFVHHFCHKVFAYHFEDNNEDDWITRYFFTGGTMPAANLLLYFQEDVTVVNHWLVNGKHYAQTSEEWLKRMDKNMTSIKPIMESTYGKDSATKWTVYWRTFFIAVAELFGYNNESKYDSELESDDGFEDFEDESESEVSEGELESEDDSEAEDKSESEGDSESEEDFASEEESEDDDSGNSEGESDGESDSDPDFDDDP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03797 430 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 81 343 IPR029063 -
Vifa2g03797 430 Coils Coil 113 133 - -
Vifa2g03797 430 FunFam Cation-transporting ATPase 72 349 - -
Vifa2g03797 430 Gene3D Vaccinia Virus protein VP39 74 351 IPR029063 -
Vifa2g03797 430 Pfam Mycolic acid cyclopropane synthetase 81 329 - -
Vifa2g03797 430 MobiDBLite consensus disorder prediction 352 430 - -
Vifa2g03797 430 CDD AdoMet_MTases 135 237 - -
Vifa2g03797 430 MobiDBLite consensus disorder prediction 350 430 - -
Vifa2g03797 430 PANTHER - 6 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03797 Vifa-Chr2 1112184180 1112195261 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03797 81 329 Acyl Lipid Metabolism Gene Families AT3G23530 26.772 5.62e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03797 - - gmx:100818389 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03797 2 1112184180 1112195261 Vifa2g03797 2 1112184180 1112195261 ECH