Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03791 ATGGATCAATTCAAAGGACAGCCTCGTCTTCCCAAATTCGCAGTTCCAAAACGTTACGACATTAGGCTTAAACCAGACCTCATCGAATGCCGTTTCTCCGGTTCCGTAGCCGTCAATCTCGACGTCATCACCGCTACTCACTTCATCGTTCTCAATGCCGCTGAACTCACCGTTGCTAACGACGCCGTTTCTTTCACCAACCGTGATTCCTCCAAGGTTTTCAAACCTTCAAAAGTTGAATTATTTGAAGATGATGAAATTCTCGTCTTGGAGTTTCCCGAGGAAATACCTACCGGACTGGGTCTATTGAATATTCAGTTTCATGGAATATTGAATGATCGAATGAAAGGTTTTTACAGAAGCAAATATGAGCATAATGGTGAGAAAAGGAATATGGCAGTTACACAGTTTGAACCAGCTGATGCTAGGCGATGCTTTCCTTGTTGGGATGAACCTGCTTGCAAGGCCACTTTCAAGATCACATTGGATGTGCCTTCCGATCTTGTTGCTCTCTCCAACATGCCAATTGTTGAAGAAAAAATTGATAACAATCTCAAAACTGTTTCATATCAAGAATCACCAATCATGTCGACATATTTGGTTGCTGTCGTTGTTGGGTTGTTTGATTATGTGGAAGATCATACTCCCGATGGGGTCAAAGTCCGAGTGTATTGTCAAGTTGGCAAGGCAAACCAAGGGAAATTTGCTCTTGATGTTGCTGTCAAAACTTTGGGACTATACAAGGATTACTTTGACACTCCTTACACCTTGCCAAAATTGGATATGATCGCAATACCGGATTTTGCTGCTGGGGCCATGGAGAATTATGGTTTGGTTACATACCGGGAGACTGCTTTACTCTATGATGATCAGCATTCTGCTGCTGCTAACAAACAGAGGGTTGCAATTGTTGTAGCTCATGAGCTAGCACATCAATGGTTTGGCAATCTTGTTACAATGGAGTGGTGGACCCATTTATGGCTGAATGAGGGTTTTGCAACATGGGTGAGTTATTTAGCTGCTGATGGCTTGTTTCCTGAGTGGAAAATATGGTCTCAATTTCTTCATGAATGTGAGGCGGGTCTTAGACTGGACGGGCTTGCTGGATCCCACCCAATTGAGGTGGAGATAAATCATGCTCGTGAGATTGATGAGATATTTGATGCAATAAGCTATAGAAAAGGTGCATCTGTCATTAGGATGCTGCAAAGCTATCTTGGTGCTGAAAGCTTTCAGAGGTCACTAGCTTCATATATAAAAAGGCATGCTTGTTCAAATGCTAAGACTGAGGATCTATGGGCTGCACTTGAAGAAGGATCTGGTGAACCTGTGAATAAGTTAATGACCACATGGACTAAGCAGCAAGGATATCCTGTTGTATCTGTTAAAGTTAATAATCAGAATTTGGAGTTTGATCAGTCACAATTCTTGTCAAGTGGTGCTCAAGGGGAAGGCCAATGGATTGTTCCAATAACACTATGCTTTGGCTCATATGACGTCCGCAAAAATTTCCTCTTCCAAACAAAATCTGAAACACGTGACGTTAAAGAGTTACTCGGTTCCCCGATTGCCGAAGACAGCAAATCTTGGATTAAACTTAATGTGGAGCAGTCTGGTTTCTACAGGGTGAAATATGATGAGTTGCTTGCTGCTAAACTTAGATATGCAATAGAGAAAAAATTATTATCTCCATCAGACCGGTTTGGAATTTTGGATGATACATATGCACTTTGTATGGCTCGCAAAGAATCATTGACCTCCTTGCTTAACTTGATGGGAGCTTTTAGAGAGGAAGATGATTATACTGTGCTCTCTAACCTGATATCAATAAGTGATAAAGTTCAACGTATTGCTGCTGATGCAGTTCCAGACTTACTAGATTATTTCAAACAGTTTTCTATTAATGTTCTACAGTACTCTGCAGAGAGGCTTGGTTGGGATCCCAAACCAGGAGAAACTCATGATGAGGCATTGTTGAGAGGAGAAATTTTGACTTCCCTTGCTGAACTTGGACATGATCTGACACTGGATGAAGCAAGCAGGCGATTCCAGGCTTTCTTAGAAGACAGAAATACTCCACTTCTTCCACCTGATATAAGAAGGGCAGTTTATGTCGCTGTAATGAAACGGGCAACCAAATCTAACCGGGCGGGTTATGAATCACTTCTGAAAGTATACAGAGAAACTGACCTAAGTCAGGAGAAAACGCGTATTCTGGGCTCGCTGTCTTCTTCATCTGATCCAGACCTAATTCTTGAAGTTCTTAACTTCATGTTATCTTCGGAGGTTCGAAGTCAGGATGCTGTTTTTGGACTCGGTGTCAATCGGGAAGGAAGAGACGTGGCTTGGGCATGGCTTAAGGAAAATTGGGAGCGCATCTCAAAAACTTATGGTTCTGGATTCTTAATAACTCGCTTTGTCAGTGCAACTGTCTCACCGTTTGCTTCCCTTGAGAAGGCGAAGGAAATAGAAGAATTCTTTGATAGCCATCCTATGCCCGCCATTGTTAGAACTTTAAAGCAGAGCCTGGAGCGAGTTAATATAAATGCAAACTGGGTTCAGAGTGTTCAGAATGAAAAGGGTCTTGCTGATGTTATAAAGGAGTTGGCATACAGAAAATACTAG 2625 0.4206 MDQFKGQPRLPKFAVPKRYDIRLKPDLIECRFSGSVAVNLDVITATHFIVLNAAELTVANDAVSFTNRDSSKVFKPSKVELFEDDEILVLEFPEEIPTGLGLLNIQFHGILNDRMKGFYRSKYEHNGEKRNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSDLVALSNMPIVEEKIDNNLKTVSYQESPIMSTYLVAVVVGLFDYVEDHTPDGVKVRVYCQVGKANQGKFALDVAVKTLGLYKDYFDTPYTLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVAIVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADGLFPEWKIWSQFLHECEAGLRLDGLAGSHPIEVEINHAREIDEIFDAISYRKGASVIRMLQSYLGAESFQRSLASYIKRHACSNAKTEDLWAALEEGSGEPVNKLMTTWTKQQGYPVVSVKVNNQNLEFDQSQFLSSGAQGEGQWIVPITLCFGSYDVRKNFLFQTKSETRDVKELLGSPIAEDSKSWIKLNVEQSGFYRVKYDELLAAKLRYAIEKKLLSPSDRFGILDDTYALCMARKESLTSLLNLMGAFREEDDYTVLSNLISISDKVQRIAADAVPDLLDYFKQFSINVLQYSAERLGWDPKPGETHDEALLRGEILTSLAELGHDLTLDEASRRFQAFLEDRNTPLLPPDIRRAVYVAVMKRATKSNRAGYESLLKVYRETDLSQEKTRILGSLSSSSDPDLILEVLNFMLSSEVRSQDAVFGLGVNREGRDVAWAWLKENWERISKTYGSGFLITRFVSATVSPFASLEKAKEIEEFFDSHPMPAIVRTLKQSLERVNINANWVQSVQNEKGLADVIKELAYRKY 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03791 874 Gene3D - 547 860 - -
Vifa2g03791 874 Pfam Peptidase family M1 domain 235 451 IPR014782 GO:0008237|GO:0008270
Vifa2g03791 874 FunFam Aminopeptidase 548 864 - -
Vifa2g03791 874 FunFam Aminopeptidase 210 456 - -
Vifa2g03791 874 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 9 206 IPR042097 -
Vifa2g03791 874 CDD M1_APN-Q_like 18 453 IPR034016 -
Vifa2g03791 874 Gene3D - 457 545 - -
Vifa2g03791 874 Gene3D Neutral Protease Domain 2 209 456 IPR027268 -
Vifa2g03791 874 Pfam ERAP1-like C-terminal domain 530 847 IPR024571 -
Vifa2g03791 874 Gene3D tricorn interacting facor f3 domain 3 208 IPR042097 -
Vifa2g03791 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 143 158 IPR001930 GO:0006508
Vifa2g03791 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 304 319 IPR001930 GO:0006508
Vifa2g03791 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 323 335 IPR001930 GO:0006508
Vifa2g03791 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 190 205 IPR001930 GO:0006508
Vifa2g03791 874 PRINTS Membrane alanyl dipeptidase (M1) family signature 268 278 IPR001930 GO:0006508
Vifa2g03791 874 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 3 855 - -
Vifa2g03791 874 FunFam Aminopeptidase 1 208 - -
Vifa2g03791 874 FunFam Aminopeptidase 457 545 - -
Vifa2g03791 874 Pfam Peptidase M1 N-terminal domain 15 200 IPR045357 -
Vifa2g03791 874 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 215 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03791 Vifa-Chr2 1111385009 1111391829 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03791 K08776 - gmx:100811437 1499.95