Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03761 ATGGCGTTTCTAACTCGAACATCCTCACGATTTTCTCACCTAGCTTCACCACAACGCGCACTTTCTCTCCACACAACCCTACCTTCTCTATCCACAACCTCACCTACACCATATGCACCACCGCCTCCCCCATCGGCTTCCTCCCCCGCCGGCCTTTCAAAGACCGGCGAGTACGTGATCTCAAAGGTTGATGATCTCTTGAATTGGGCCCGTCGCGGTTCCCTCTGGCCAATGACCTTTGGGCTCGCTTGTTGCGCTGTTGAAATGATGCATACCGGTGCCGCTCGTTACGATCTGGATCGATTTGGGATCATTTTTAGACCTAGCCCTCGTCAATCTGATTGCATGATTGTTGCTGGTACTCTTACCAACAAAATGGCTCCCGCTCTTCGCAAGGTTTATGATCAAATGCCGGAGCCTAGATGGGTTATCTCCATGGGAAGTTGTGCTAATGGAGGAGGATACTACCACTACTCTTACTCTGTTGTTAGGGGATGTGACAGGATAGTTCCCGTTGATATTTATGTTCCAGGCTGCCCTCCAACTGCCGAGGCTTTACTGTATGGACTCCTCCAACTTCAGAAGAAGATCAATAGGCGCAAGGACTTCCTCCATTGGTGGTCACAGTGA 630 0.5048 MAFLTRTSSRFSHLASPQRALSLHTTLPSLSTTSPTPYAPPPPPSASSPAGLSKTGEYVISKVDDLLNWARRGSLWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWSQ 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03761 209 Gene3D - 55 209 - -
Vifa2g03761 209 MobiDBLite consensus disorder prediction 31 52 - -
Vifa2g03761 209 NCBIfam NADH-quinone oxidoreductase subunit B 59 199 IPR006138 GO:0008137|GO:0048038|GO:0051539
Vifa2g03761 209 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 84 193 IPR006137 GO:0051536
Vifa2g03761 209 SUPERFAMILY HydA/Nqo6-like 57 201 - -
Vifa2g03761 209 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 165 181 IPR006138 GO:0008137|GO:0048038|GO:0051539
Vifa2g03761 209 FunFam NADH-quinone oxidoreductase subunit B 2 50 209 - -
Vifa2g03761 209 PANTHER NADH DEHYDROGENASE 53 208 - -
Vifa2g03761 209 MobiDBLite consensus disorder prediction 34 48 - -
Vifa2g03761 209 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 47 198 IPR006138 GO:0008137|GO:0048038|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03761 Vifa-Chr2 1102589518 1102592616 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03761 K03940 - gmx:100802267 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03761 2 1102589518 1102592616 Vifa2g03761 2 1102589518 1102592616 ECH