Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03735 ATGGCACGTTTGTTCGATTGGGGTGCGAAAGAGAGTCATAGAGGAACACCAGTGGTTGTGAAAATGGAGAATCCGAATTGGTCCATGGTTGAACTCGAGGGTCCTTCAGAAGAAGATATTCTCATGACAAACCCTTCTTCAAGAGACAAAGGAAGAGGGAAAAACGCGAAACAGCTCACTTGGGTTCTTCTTTTGAAAGCCCATAGAGCTGCGGGTTGTTTAACTTCAATAGCCCCTGCATTGTATGCTCTTGTCTCCGCCGTGAAACGCCGCGTGGCTTCCGGGAGGACAGACGCGGAAACCGACACAGAGGGTGGTGGTGGTGATGGGGGTTGGGAAAAGGAAAACCCTACCGTGAAAAGTTGGCATTTTAGTGCTCCGCATCTTGAATTATGGGCACCGGCATTTGGGGTTAAGGATGTCTTTGATTGGTTTTATGCTAGATGGGTTTTGGTTCGTGTTGATTATCTTGCTCCACCTTTGCAGTTTCTCACAAATGCTTGTATTGTGCTTTTCCTTATTCAGAGTATAGATAGGTTGGTTCTTTGTTTAGGTTGTTTTTGGATCCGGTTTAAGAAAATCAAACCTGTTCCAAAAGGTGGTGGTGGTGGTGATTTAGATCTTGAATCTGGAGAAAAGGGTTTCTTCCCTATGGTTCTTATTCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAACAATCTATTGCTGCAGTGTGTAATTTGGATTGGCCAAAATCAAATTTTCTTATTCAAGTTCTTGATGATTCGGATGACCCGATAACGCAATCGTTGATTAAGGAAGAGGTTCAAAAATGGCAACTAGAAGGTGCCAACATTTTGTATCGACACCGTGTGATTCGAGATGGGTACAAGGCTGGTAATCTGAAATCTGCAATGAATTGTAGCTATGTGAAGGATTATGAATTTGTTACAATTTTTGATGCCGACTTTCAACCTACCCCAGATTTCCTTAAAAAAACTGTTCCTCATTTTAAGGATAATGACGAATTAGGACTTGTTCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAATCTTTTAACAAGGTTGCAGAATATTAATTTGTCTTTCCATTTTGAAGTGGAACAACAAGTGAATGGTGTTTTTCTTAATTTCTTTGGCTTCAATGGAACTGCTGGAGTTTGGAGAATAAAAGCTTTGGAAGAAGCTGGTGGTTGGTTAGAGAGAACTACTGTGGAGGATATGGACATTGCTGTTCGAGCTCATCTCCATGGATGGAAATTCATTTTCCTCAATGATGTCGAGTGCCAATGTGAGTTACCTGAATCTTATGAAGCTTACAGAAAACAGCAGCATAGATGGCATTCTGGGCCAATGCAGTTGTTTCGCCTTTGTTTGCCTGACGTCATACGAGCCAAGATAAGCATATGGAAGAAATTCAACATGATATTTCTCTTTTTCCTTCTAAGAAAACTGGTGTTACCATTCTATTCATTCACCCTGTTCTGCATAATTCTTCCCATGACAATGTTCGTACCGGAGGCCGAAATTCCTGCATGGGTTGTTTGTTACATCCCAGCAATCATGTCATTTCTCAACATTCTTCCAGCACCAAAAGCTTTTCCCTTCATTGTACCGTATCTCCTATTCGAGAACACCATGTCAGTTACAAAATTCAATGCCATGATCTCAGGTCTATTCCAGCTTGGAAGCGCATACGAATGGGTCGTCACTAAGAAATCTGGCCGTTCATCAGAGGGTGATCTAGCTTCTTTGATCGAGAAACCAAAGCATCAAAGGGGGTCATCCGCCCCTGATCTCGAGGAAATGAAAGAAGAAATTAGGAAACAAGAAGAAAACGTGACGAAGAAAAAGAAGAAAAAATATAATAAAATGTATATGAAGGAACTTGCTTTGGCTTGTTTACTCTTAACAGCTTCAGCAAGAAGTCTTCTTTCAGCTCAAGGAATTCACTTCTACTTCTTGTTATTCCAAGGAGTATCATTCCTTTTGGTGGGTCTAGATTTGATTGGTGAACAAGTAGATTGA 2034 0.412 MARLFDWGAKESHRGTPVVVKMENPNWSMVELEGPSEEDILMTNPSSRDKGRGKNAKQLTWVLLLKAHRAAGCLTSIAPALYALVSAVKRRVASGRTDAETDTEGGGGDGGWEKENPTVKSWHFSAPHLELWAPAFGVKDVFDWFYARWVLVRVDYLAPPLQFLTNACIVLFLIQSIDRLVLCLGCFWIRFKKIKPVPKGGGGGDLDLESGEKGFFPMVLIQIPMCNEKEVYQQSIAAVCNLDWPKSNFLIQVLDDSDDPITQSLIKEEVQKWQLEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVTIFDADFQPTPDFLKKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIRAKISIWKKFNMIFLFFLLRKLVLPFYSFTLFCIILPMTMFVPEAEIPAWVVCYIPAIMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLASLIEKPKHQRGSSAPDLEEMKEEIRKQEENVTKKKKKKYNKMYMKELALACLLLTASARSLLSAQGIHFYFLLFQGVSFLLVGLDLIGEQVD 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03735 677 FunFam probable xyloglucan glycosyltransferase 5 210 435 - -
Vifa2g03735 677 SUPERFAMILY Nucleotide-diphospho-sugar transferases 219 495 IPR029044 -
Vifa2g03735 677 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 136 674 - -
Vifa2g03735 677 Pfam Glycosyl transferase family group 2 311 506 IPR001173 -
Vifa2g03735 677 Coils Coil 599 622 - -
Vifa2g03735 677 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 210 434 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03735 Vifa-Chr2 1092418064 1092420814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03735 1 677 Miscellaneous Gene Families AT4G07960 75.035 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03735 - - gmx:100805969 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03735 2 1092418064 1092420814 Vifa2g03735 2 1092418064 1092420814 ECH