Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03705 ATGAAGCAAAAAAATCTCAAAATTCTCATTACAGCAACACTTACAGTGTTTATGATGCTATCATTCTTTTGTTGCACAAACGTTGCAATTAGCACAACCAACAACCTTAATCCATTGATCCTAATACCAGGTAACGGAGGAAACCAACTAGAAGCAAAACTAACCACACAATACAAACCTTCTACCTTAATCTGTGATCCATGGTACCCTCCTTTCAAGAAGAAAAATGGATGGTTCAGACTATGGTTTGATACATCCGTTTTACTTGCTCCTTTCACAAAATGTTTTGCTTCTCGCATGACTCTTTACTATGATAAACAACTTGATGATTACTTTAATGCCCCTGGAGTGCTCACACGTGTCCCTCGCTTTGGTTCTACCTATTCTCTTATGTATCTTGATCCTAGTCTCAAGGTTGTGACAGATTACATGGCACCTTTAGTTGAATCATTAGAACATCTTGGTTATATAGATGGTGAAAATTTGTTTGGAGCTCCTTATGATTTTCGATATGGTTTAGCAGCACCGGGCCATCCATCTCGAGTAGGTTCGAAATTCTTAAACGATTTGAAGAATTTGATTGAAGAAGCAGCTCTTTCTGCTCCATGGGGTGGAACTGTTGATGAAATGTTTACTTTTGCATCGGGGAATTCTTTGGGGGTGCCATTGGTAAATCCTTTGTTAGTGAGAAATGAACAGAGAAGTTCTGAGAGTAATCTATGGCTTTTGCCTAATCCTAAGATGTTTGATGTTGATAAACCATTAGTTACTACTCCGAGTAGAAGCTATTCGGCTCATGATATGGTTGATTTTCTCAAAGATATTGGTTATCCTGAAGGAGTTTATCCTTATGAAACACGAATTTTGCCCTTGATAGCGAAGATAGAAGCACCAGAAGTGGATATAACTTGTATTGTTGGGGAGGGTGTGAGAACTCCTGAGGAATTGTTTTATAGAAACGGTGATTTTGATGAACCGCCAGAGTTTTTGTATGGTGATGGCGATGGAACTGTGAATATGGTGAGCTTGTTGGCACTTGAAAAATTATGGAAAGATGAGAAGAATCAGTATTTGAAAGTGATTAAGATTGGAGGGGTGTCTCATACTTCAATATTGAAAGATAAAGTTGCAGTTGATGAAATAATTGGTGAGATTAGTAGACTTAATTCTAATGTTCAACTTGGTTTGAGCAATACTTCTTTTGCTATAACTGATGTCAAATGA 1224 0.3758 MKQKNLKILITATLTVFMMLSFFCCTNVAISTTNNLNPLILIPGNGGNQLEAKLTTQYKPSTLICDPWYPPFKKKNGWFRLWFDTSVLLAPFTKCFASRMTLYYDKQLDDYFNAPGVLTRVPRFGSTYSLMYLDPSLKVVTDYMAPLVESLEHLGYIDGENLFGAPYDFRYGLAAPGHPSRVGSKFLNDLKNLIEEAALSAPWGGTVDEMFTFASGNSLGVPLVNPLLVRNEQRSSESNLWLLPNPKMFDVDKPLVTTPSRSYSAHDMVDFLKDIGYPEGVYPYETRILPLIAKIEAPEVDITCIVGEGVRTPEELFYRNGDFDEPPEFLYGDGDGTVNMVSLLALEKLWKDEKNQYLKVIKIGGVSHTSILKDKVAVDEIIGEISRLNSNVQLGLSNTSFAITDVK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03705 407 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 198 390 - -
Vifa2g03705 407 Gene3D alpha/beta hydrolase 85 208 IPR029058 -
Vifa2g03705 407 SUPERFAMILY alpha/beta-Hydrolases 35 384 IPR029058 -
Vifa2g03705 407 Gene3D alpha/beta hydrolase 320 386 IPR029058 -
Vifa2g03705 407 Pfam Lecithin:cholesterol acyltransferase 198 274 IPR003386 GO:0006629|GO:0008374
Vifa2g03705 407 Pfam Lecithin:cholesterol acyltransferase 79 197 IPR003386 GO:0006629|GO:0008374
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03705 16 389 Acyl Lipid Metabolism Gene Families AT1G27480 52.871 3.28e-150 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03705 - - gmx:100804027 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03705 2 1083506528 1083508030 Vifa2g03705 2 1083506528 1083508030 ECH