Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03678 ATGTCGAATCGTTACGGTCAGGGTAGACAGGACAATCACAACAACAACAACAAGGGTTTCAACAAAACTCAGAAGAAATTTGTCCCTAAGAATCCCACTCCAACCCTTTCAACTTCCCTAAGAGAAAACCAACTAACTGGTTCCGGTAGTAGTGCCAATTCGTCGGGTAGGGTTCAACCGGGGGGTGTGAATGGCAATTTCGTGAATTATTTGCCACAAGATGAAGCTGTGGCTGCTGGTTTTCGTGCGGAGGATGGTGGATTGGATGCCCTTGAATCTCAGAGAGTTGTTGATCTTCTTAATTCAGAGTTGTCTCGTTTGCTCAAGCTCAAACCCAAGGAATTCTGGTCACAAGTGGCTGGTGATACCTCTCTGCATGAGTTTCTCAACAGCTTTCTGCAGTTTAGGAGCAGATGGTATGATCTCCCTCACCGCGGGACCAGAGGGATTGTTGCTGGTGTTATTTTTGGAGAGCATGATTTGAGCCGTCGTGTTTTCATGGTATTATATCGGATGTCTTCTAATAGAGATCCTGGTGCTCGACCTTCTGATATGCTAAGTTTGAGAGATCATGAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGATTTGCCAAAGTTGTTTGATATATGTGCCATATACAATCATGAAAATGAAGAATTGACAAAATTGCTGGTCAGAAAAGCATTGCATGCTCAGCCTTGGATGCATGATAATTTGACTGCAGTAACATTTCATTTTATGAGCATTGCAAGCACAATGCACGAACGGTGCAGTTCATCATTGGAGGTCTTATTTGCTTCTGGAAGTCTTGATGACCATAATGCTACTTTTCTTCAAACCGATCTTCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGATGCATTTGTTTGTGCCTACGAACCAGCAGCTTTATTCTTCTCTTCCCCTGTTGAGATGAGTTACGGGAATGAGGATCTGCTGGGCTTCCTTGCCAGATTGCATGATTTGCTAATTCCATCCATGCAAAAGGGGTTCCATATCATTTTCGCGGACAAACAGGATGACACCGTCTCTAATATTGTGGTTAGTTTGAAGATGTTAAGAATGAGGTTGGCGAAGTTTGGGTGGCAACTATTGCACTTTTGCTATTTGAGTGACGATGTTTTCCTAGATAGCATTCCTCTTCCAGCTGCCACGAAGATGTTTCCTGCCAATGTGGAAGACCCGGTCATCAGAGCAGATATTCTGGTTCAGACATTTAGAGACATCAATTCGGTATCATTAAGTTTCCAGGAAATCTATCGGAAGGAAACATTTCTTCAAGATGTCGAAAGGAATTTCAATATATTAAGCAGGATTGAGGGATTAAAGCATAATGGATGGATAATTTTTGACGATGAACAACTAAAATATATATCTGGGATTTTGAGTTCTCCGAAGGAGATTAATAAGGAATCATACTCTGCAAAGATTGCTGTGCCGAACCAAACAGTGCAGATGGATGAAGAGGCTGTGGTTCTAGAGTCAAAAATCAGTCAAATCAGGGACCTGTTCCCTGATTATGGTAAAGGGTTTTTATCTGCATGTCTCGAGGTCTACGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAAGGAACCCTTCATAATGATCTGATGTGCTTAGATACTTCATTAGAGACGGTGCCACAGTCACAAGCCAAGTCCACCACTGTTAGCGGGAAAGATAAAGGAAAAGGTATACTAATTGATTCAACGTCAGTGTCCTCAAATACAAAAGTTTATAGTGGGAAGAACCAGACACAAGGGCCACTGATGCCATCATCTGCTCCAGTTGGAAAATTTGTGAGGAAATCTAGAGCCGACACGCCTGATCCAAGTATTTTGGACAATAACGATGAGAAAGATGCATCGAGAATTTTACAATATGAATACGATGATGAGTATGACGACTCTTTTGATGACTTGGGTCTAAGCGTAGCGGACTCTGGAGTAGAAGAAAATGAAATACTTGGCGACGATGAAATAAACGAAAAATCGGGTAGACCGAGGGCAATAGGGTCTGGAAACTCAATCCAAAATGCCTCTAATACAAAATGGGGGTCCAGGAAAGCGCCACAGTACTATGTCAAGGATGTTAATGAAGCTCAAAAGGAAATGATACATGGTCTTGGACGTGGCGGAAACCTTCCTCTTGGTGCGGTACAGAAGTTGGCAGATTCTTACAAGGGAGGTGGTAACCAGTTCCATGTTTCTGAAACAGAAGGGAGAGGGAATAGCAGTGGCAGGGGAAAGAGAGAAGGAGGAAAACAAATTGAACATAATCAACAGCAGGGAAAACAATCTGATGTTTCTGAAGCAGAAGGTAGAGATCAGGGTCCAAATAACAGGGGGAGAGGGAGAGGGAGGGGGAGGGGAGGAGGTAGAAACAACCATTACAGGAAGGACCAAGCCATGAAGAAGCATTTCTCTGGATTGAGTGGTTTTTGA 2484 0.4263 MSNRYGQGRQDNHNNNNKGFNKTQKKFVPKNPTPTLSTSLRENQLTGSGSSANSSGRVQPGGVNGNFVNYLPQDEAVAAGFRAEDGGLDALESQRVVDLLNSELSRLLKLKPKEFWSQVAGDTSLHEFLNSFLQFRSRWYDLPHRGTRGIVAGVIFGEHDLSRRVFMVLYRMSSNRDPGARPSDMLSLRDHEVLLQEKKLLDLPKLFDICAIYNHENEELTKLLVRKALHAQPWMHDNLTAVTFHFMSIASTMHERCSSSLEVLFASGSLDDHNATFLQTDLLEVMDFINDAIVSMDAFVCAYEPAALFFSSPVEMSYGNEDLLGFLARLHDLLIPSMQKGFHIIFADKQDDTVSNIVVSLKMLRMRLAKFGWQLLHFCYLSDDVFLDSIPLPAATKMFPANVEDPVIRADILVQTFRDINSVSLSFQEIYRKETFLQDVERNFNILSRIEGLKHNGWIIFDDEQLKYISGILSSPKEINKESYSAKIAVPNQTVQMDEEAVVLESKISQIRDLFPDYGKGFLSACLEVYDQNPEEVIQRILEGTLHNDLMCLDTSLETVPQSQAKSTTVSGKDKGKGILIDSTSVSSNTKVYSGKNQTQGPLMPSSAPVGKFVRKSRADTPDPSILDNNDEKDASRILQYEYDDEYDDSFDDLGLSVADSGVEENEILGDDEINEKSGRPRAIGSGNSIQNASNTKWGSRKAPQYYVKDVNEAQKEMIHGLGRGGNLPLGAVQKLADSYKGGGNQFHVSETEGRGNSSGRGKREGGKQIEHNQQQGKQSDVSEAEGRDQGPNNRGRGRGRGRGGGRNNHYRKDQAMKKHFSGLSGF 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03678 827 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 9 826 - -
Vifa2g03678 827 MobiDBLite consensus disorder prediction 590 605 - -
Vifa2g03678 827 MobiDBLite consensus disorder prediction 675 700 - -
Vifa2g03678 827 MobiDBLite consensus disorder prediction 757 771 - -
Vifa2g03678 827 SUPERFAMILY UBA-like 502 560 IPR009060 GO:0005515
Vifa2g03678 827 CDD CUE_ASCC2 505 544 IPR041800 -
Vifa2g03678 827 MobiDBLite consensus disorder prediction 782 796 - -
Vifa2g03678 827 MobiDBLite consensus disorder prediction 742 827 - -
Vifa2g03678 827 Pfam CUE domain 505 545 IPR003892 GO:0043130
Vifa2g03678 827 ProSiteProfiles CUE domain profile. 503 546 IPR003892 GO:0043130
Vifa2g03678 827 Gene3D - 501 546 - -
Vifa2g03678 827 SMART cue_7 503 545 IPR003892 GO:0043130
Vifa2g03678 827 MobiDBLite consensus disorder prediction 590 609 - -
Vifa2g03678 827 MobiDBLite consensus disorder prediction 682 700 - -
Vifa2g03678 827 MobiDBLite consensus disorder prediction 1 62 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03678 K18667 - gmx:100778129 1142.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03678 2 1076835415 1076842405 Vifa2g03678 2 1076835415 1076842405 ECH