Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03672 ATGAAGGAACAAGAACTATGCGAGGCGGCGATTAAGGGTGAAACGGAGACGGTAACGGGTCTTATTGATTCCGGCGCCGACGTTACCTATTTCGACGGCGGTGGTATCACTCCTCTCATGCACGCTGCAAAGCACGGCCATGCACCCATCCTCAACCTCCTTCTCTCCGCCGGCGCTCCTTGGAACGCTCTTTCTCCTTCCAACTTATCGGCCGGTGATTTCGCAATGCAAGAAGGTCATCAAGAAGCCTACGAGCTTCTCCTCAATGCCGGGATTCGATCTGAATTAGTGTTGGGAACAATTGCCAGGAAGGAAAAGAAAAACACTGATTCTGGATATGATTATTTGGAAGATAGGGTGAGTTTTAGTGAAGGAGGTGGTCATGTGCTTAATATTGGATTTGGAATGGGGCTTTTTGATACGGCTATACAGCAATATTCACCTGTGAAACACACCATTGTTGAAGCTCATCCGGAGGTTTATGAACGCATGCTTCGCGATGGTTGGGGTGAGAAGGAAAATGTTAGGATTATTTTTGGCCGCTGGCAAGATGTTCTGCCTCAGCTTGAAACATATGATGGGATATTCTTTGACACCTATGGGGAGTACTATGAAGATTTGAGAGAGTTCCACCAACATCTCCCAGTATTGTTGAAACCGGATGGAGTTTACTCTTTCTTCAATGGCCTATGTGGTGGTAATGCATTTTTCCATGTTGTTTACTGCCACTTGGTATCACTTGAGCTTGAGAATTTGGGGTATTCCACACAATTAATTCCTTTGCCTGTTAAGGATTGCTTGGGGGAACAAGTTTGGGAAGGTGTTAAACATAGATACTGGCAGCTTGATACATACTATCTCCCTGTTTGTCAGTCTGCAGAGAACTCTGAGTGA 894 0.4564 MKEQELCEAAIKGETETVTGLIDSGADVTYFDGGGITPLMHAAKHGHAPILNLLLSAGAPWNALSPSNLSAGDFAMQEGHQEAYELLLNAGIRSELVLGTIARKEKKNTDSGYDYLEDRVSFSEGGGHVLNIGFGMGLFDTAIQQYSPVKHTIVEAHPEVYERMLRDGWGEKENVRIIFGRWQDVLPQLETYDGIFFDTYGEYYEDLREFHQHLPVLLKPDGVYSFFNGLCGGNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEQVWEGVKHRYWQLDTYYLPVCQSAENSE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03672 297 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 290 IPR029063 -
Vifa2g03672 297 SUPERFAMILY Ankyrin repeat 6 93 IPR036770 -
Vifa2g03672 297 Pfam Ankyrin repeats (many copies) 21 75 IPR002110 GO:0005515
Vifa2g03672 297 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 20 31 IPR001969 GO:0004190|GO:0006508
Vifa2g03672 297 SMART ANK_2a 1 30 IPR002110 GO:0005515
Vifa2g03672 297 SMART ANK_2a 34 63 IPR002110 GO:0005515
Vifa2g03672 297 Gene3D - 1 105 IPR036770 -
Vifa2g03672 297 PIRSF Rmt2 113 294 IPR017408 GO:0016274
Vifa2g03672 297 PIRSF Rmt2 1 121 IPR017408 GO:0016274
Vifa2g03672 297 ProSiteProfiles Ankyrin repeat region circular profile. 34 59 - -
Vifa2g03672 297 Gene3D Vaccinia Virus protein VP39 106 292 IPR029063 -
Vifa2g03672 297 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 123 292 - -
Vifa2g03672 297 FunFam Protein arginine N-methyltransferase 2 1 99 - -
Vifa2g03672 297 CDD AdoMet_MTases 129 224 - -
Vifa2g03672 297 ProSiteProfiles Ankyrin repeat profile. 34 66 IPR002110 GO:0005515
Vifa2g03672 297 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 64 297 IPR026480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03672 Vifa-Chr2 1074616461 1074618300 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03672 K18477 - gmx:100796916 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03672 2 1074616461 1074618300 Vifa2g03672 2 1074616461 1074618300 ECH