Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03671 ATGGCTTCGATTTTTGATCGATGGGAAAAAGATCCTTTCTTTAACGCCGCTGAAGAAGTTCAAGAATCTGCTGATAGGGTAGAATCTACGTATAGGATATGGATTCATGCAATGAAAAATGCGTCCAGTACTTGGAACTCTGATGAACTTCGAAGAGATCTTCATACTGCCATGGGCACTGCTAAGTGGCAGTTAGATGAATTTCAACGGGCGGTGAAGTCGAGTTATAGCAAAAGCTCCAGTGATGATGCTAGAAATAGGCATCAAGATTTTGTTGCTGCGATTGAAGGCAAGATTTCGAAAGTGGAGAATTTGTTACAGCTGCATGAATCTGTTCCTTTAGGGACGCCGTTGTCGCCTTCTGGTGGTAAACCGCTGGTTAGATTTACTGGGAGAGATGGTGTGAATCCACAATTAGGTGGTAGAGATTCGGTTAGAGCAGCGGTTGCGGTGGAGGAGAAACCACATGGACATCGCAGGGTGGCTAGCGCTGATGCTGATATTAGTTCTTGGAAAATTGCTGTTTTGGATGATGCGCAACAATCGACTACCTCTAAAGATTCTTCTGGTCATACTCCTATGCATAAGGTAGCCAGTGTCTCTAGATTTTTTGGTTCCGTGGAATCCATTTCTAAGTTTAAGTGGCCGAAGAGTGGTTATAGGAAGCTGAAAGCAATGGATAATCATCAAGAAACTGATAATGCACCACTACCGTCAACCGAATACGACGAGGCCATAGATGATTGCAATGAAAGAAGTAAGCTTTGCCTTCATAGTTGTGATGGATGTTATAATAAGCCACTCCAGGGGTGGTACGGGGCTTTCCAAAGACAGCTTCAAAGATCTCAATACCAAATGCAGTACAACCGGCCTGTTCAAATAGCTGTCTGGATAGTTATTATCCTTTGCTTGATTGTTTTAATTGCATTTTGTGCAATGCAGAAAGGAAGATGA 954 0.4298 MASIFDRWEKDPFFNAAEEVQESADRVESTYRIWIHAMKNASSTWNSDELRRDLHTAMGTAKWQLDEFQRAVKSSYSKSSSDDARNRHQDFVAAIEGKISKVENLLQLHESVPLGTPLSPSGGKPLVRFTGRDGVNPQLGGRDSVRAAVAVEEKPHGHRRVASADADISSWKIAVLDDAQQSTTSKDSSGHTPMHKVASVSRFFGSVESISKFKWPKSGYRKLKAMDNHQETDNAPLPSTEYDEAIDDCNERSKLCLHSCDGCYNKPLQGWYGAFQRQLQRSQYQMQYNRPVQIAVWIVIILCLIVLIAFCAMQKGR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03671 317 PANTHER OS05G0443700 PROTEIN 152 305 - -
Vifa2g03671 317 FunFam Syntaxin 10 8 109 - -
Vifa2g03671 317 SUPERFAMILY t-snare proteins 10 106 IPR010989 GO:0016020|GO:0016192
Vifa2g03671 317 Gene3D - 9 109 - -
Vifa2g03671 317 CDD SNARE_NTD_STX6-like 11 104 - -
Vifa2g03671 317 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03671 Vifa-Chr2 1073855451 1073857257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03671 - - mtr:25489939 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03671 2 1073855451 1073857257 Vifa2g03671 2 1073855451 1073857257 ECH