Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03659 ATGTATTCACAAATGAAGAAAAACACACCAACCGACAACAACATTCCCAAAACTCCTTACAACACCAGTCATGATGATGATTCAACCGAACACTCTTCACAACATATTCAACTTTGTAACAACCCATGTTGTTTTTTCTGCATAATGAAAGAACAAAATCCATCTCTCAGAAAATCAAAAATATCAACATGCTTCAAAGAAATGCCTCAAAGAGACAGTCAAGAACATGTCTTAGTCCTCAGTGGACTATGGAACATAGCCATGACACAACCCAACGATCCAGAGTTTCCTTCTCTAGGCATATTCAACTGCATGGCGAAACTCATCATCAAAGGTACAAAAAACAAACACTGGCTTCTTCAAAATCAAAACATTTACATACCTTATTATGCTGCTCACATTATTGGTTCTTACACCATGCATAAAGAAGAGTTTGCACAGATAGCTATTCGATCCGGTGTCATACCACCACTGTTAGACCTTATGAAAGGTAAAATCAGTTGGGTTGAACAAAGGGTTTCTGTTAGAGCACTTGGTCATTTAGCTAGTTACAAAAGCACCTTTGATTTAGTCTCTGCGTATGAAGCTGAGTTGGTGAAGTCAACAATGAATTTAGCTTCATCTTGCTTAGAAAAAGTCTATGTTGAATTTGTATCTGTTAAGAGAAGAGTTGAGTATCATAGAAACTTGCTTACAAGAGGTTTAGGTGACTTAGAAATGGAGAATCGAAAAGCCGAAGAATGGGCCAGTCAACTCCAATGTTGGTCTATTTATCTTCTGAATTGCTTTGCTTCCAAAGATTCTAAGTCTTTGGAATTAATATGCAAAAAAGTTTTCTTGAATGATTTGTGTGATATGTGGGGTGGATTGATAAATAACACTTCACCAGGTGGATTTGGACTCATTAGAATCCTTTGTTATAATAACTTAGGAAGAAAAAAAATTGCTGAGTCACCAAAAGTTGTGAAAAGTTTATGTAACCTCTCAAGATCTTGTGATGATTGGCAGTATCTTGGTATAGATTGTCTTTTATTGCTTCTCAAGGACCAAAATACTAGGTACAAAATTATTGATATTGATAATGTTGATGTTGTTTCATGTCTTGTTGATTTGATTGAACTTAGAAGACTTGGTGATAAATCAAACGTTGGTGACACTATCACCAAGGTGCTAGTGCAACTTCTTGAACATAATAACAAAGATTGTTATAAATTCTCTTCGAAGACGAATCTTATTTCTTTGGATTCGAAGATGGATAGGAGGAATAAGGAGAGACTAATGTCGGAGGTAAAATCGAAAGAAAAAATGGTTAGCGCGAAGTTGATAAAGAAAGAAGGGAATAAATTGTTTAGTTTGGGAAAGGTTGAAGAAGCTGTGTTGAAGTATTGTGAAGCACTTGAAGCTTGTCCATTGAAGTATAGAAATGAAAGAATGGTGATTTATAGTAACAAAGCTCAGTGTAGTCTTTTGCTTAAAGATCCTGATTCTGCTATAAGTGATTCAACACGTGCTCTTTGTTTATGTAATCCAGCAAATACAGATGGGAAAAGTCTTTGGAGAAGATCACAAGCTTATGATATGAAAGGAATGGCAAAAGAGAGTCTTATGGATTGTGTAATGTTTATGAATGGTTTTGTTAAGTCAAATGAGAACAAAAGAGTTAAGGTTTCTTATCATGTTGCTAGGATGTTTTGTAAGCAAATGGATGCTACATGGCTCTTTAGGAATGCTTGTTCAAAGTCAAAGTCAAAGGTAATACAGAAGATTGAAGGTGATTATGAGAGTAGCAATGAGAGCAGGTTTGAAGATCAAACCTATGATCATAAGAAGAATTTCATGCCAGGTCTGTGTCCCATTATGGAAGAACCTTTTCATGTGAAAGAAGGTAGAAGGAGAAAGATGGAAAGAGCAAGAAGGAGATTAAAGAAAGGTGTTGTTGTAGCTCGATTAATGTAA 1956 0.3558 MYSQMKKNTPTDNNIPKTPYNTSHDDDSTEHSSQHIQLCNNPCCFFCIMKEQNPSLRKSKISTCFKEMPQRDSQEHVLVLSGLWNIAMTQPNDPEFPSLGIFNCMAKLIIKGTKNKHWLLQNQNIYIPYYAAHIIGSYTMHKEEFAQIAIRSGVIPPLLDLMKGKISWVEQRVSVRALGHLASYKSTFDLVSAYEAELVKSTMNLASSCLEKVYVEFVSVKRRVEYHRNLLTRGLGDLEMENRKAEEWASQLQCWSIYLLNCFASKDSKSLELICKKVFLNDLCDMWGGLINNTSPGGFGLIRILCYNNLGRKKIAESPKVVKSLCNLSRSCDDWQYLGIDCLLLLLKDQNTRYKIIDIDNVDVVSCLVDLIELRRLGDKSNVGDTITKVLVQLLEHNNKDCYKFSSKTNLISLDSKMDRRNKERLMSEVKSKEKMVSAKLIKKEGNKLFSLGKVEEAVLKYCEALEACPLKYRNERMVIYSNKAQCSLLLKDPDSAISDSTRALCLCNPANTDGKSLWRRSQAYDMKGMAKESLMDCVMFMNGFVKSNENKRVKVSYHVARMFCKQMDATWLFRNACSKSKSKVIQKIEGDYESSNESRFEDQTYDHKKNFMPGLCPIMEEPFHVKEGRRRKMERARRRLKKGVVVARLM 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03659 651 MobiDBLite consensus disorder prediction 1 31 - -
Vifa2g03659 651 Gene3D - 104 416 IPR011989 -
Vifa2g03659 651 MobiDBLite consensus disorder prediction 1 22 - -
Vifa2g03659 651 Gene3D Tetratricopeptide repeat domain 427 566 IPR011990 GO:0005515
Vifa2g03659 651 SUPERFAMILY ARM repeat 73 406 IPR016024 -
Vifa2g03659 651 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 36 636 - -
Vifa2g03659 651 SUPERFAMILY TPR-like 437 538 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03659 Vifa-Chr2 1071407874 1071409931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03659 - - gmx:100777591 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03659 2 1071407874 1071409931 Vifa2g03659 2 1071407874 1071409931 ECH