Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03648 ATGAAACGTTCACTTTCAGTTTCAGTTTCATCAGCAACGAGCGAGGAGAGAAAGATGAAGAAGGTGAAGGAGACAGAAATTGATAACGAGGTTTGTAACAAGAATCGTGGGTTGGTGAGTTTCGATGAGAACATGTTGTTTGAGGTTCTGAAACACGTGGACGCGAAAACGTTAGCTATGGCTGGTTGTGTGAACAAACAGTGGCACAAAACGGTGCAAGATGAGAGACTTTGGGAGCTGATCTGTACGAAACAGTGGGCAAACACGGGTTGCGGCGAACAACAGTTGCGATCTGTGGTTCTTGCTCTTGGTGGGTTTCGTCGTCTTCATTCTCTTTATCTTTTGCCTCTTTCAAAGCCTCAGACATCATCGTCATCGTGTTCCTCGTCTTGGGGTCCAATACCACAGGTGATTCGGTCGAAACCGTTACCTCGTTTAGGGAAAGACGAGGTTCATCTTTCTCTTTCTCTTCTCTCTATTCGTTATTATGAGAAGATGAATTTCAATAACAGAAACCTATGA 522 0.4425 MKRSLSVSVSSATSEERKMKKVKETEIDNEVCNKNRGLVSFDENMLFEVLKHVDAKTLAMAGCVNKQWHKTVQDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHSLYLLPLSKPQTSSSSCSSSWGPIPQVIRSKPLPRLGKDEVHLSLSLLSIRYYEKMNFNNRNL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03648 173 CDD F-box_AtGID2-like 39 82 - -
Vifa2g03648 173 FunFam F-box protein GID2 28 132 - -
Vifa2g03648 173 PANTHER F-BOX PROTEIN SNE 20 168 IPR044184 GO:0009937|GO:0019005
Vifa2g03648 173 Gene3D - 23 132 - -
Vifa2g03648 173 SUPERFAMILY F-box domain 42 87 IPR036047 GO:0005515
Vifa2g03648 173 Pfam F-box domain 45 79 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03648 K14495 - gmx:100527591 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03648 2 1063646846 1063647367 Vifa2g03648 2 1063646846 1063647367 ECH