Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03647 ATGGGAAGTTCGAAAACAAGCAGTGATGTTTCCGATAGCAGTAGCTCTCAAACCGAAATCGAGAATCACATTTCCGCTTCTCCATACGCTGAAGGAGAGAAAGTCCTTGCTTTCCACACTGCATGTCTTTATGAAGCCAAGGTTAAGCAAATTGAGTACAAGCGTAAACAATGGAGATTCTTTCTTCATTATCTTGGTTGGAAGAAAAGTTGGGATGAATGGGTTGGTATTGACCGTTTGTTGAAACATACTGAGGAAAATATGCGGAAAAAACTTACAATTGATGCGGAATATGGCAATGAAAAGAATGCGAGAAAGCCTCGTGCGTCATCCAAGGGTTCTAATGGAGCGAGAGGCAGGAAACGAAAGAATGATTCTCTGGTTAAGGAAAAAACTGCGGTTCTTCCTGATAAACTTGTCAACTTTCAGATTCCACCAACACTAAGGAAGCAATTAGTTGATGATTTTGAGTTTATTACGCATCTCGGCAAGCTTGTTAAACTTCCACGTACTCCTAATGTGAACGATATATTCAAGACTTATTTTGATTACAGATCGAAGAAAAGTGGACCGATAGCTGATTCGGTTGAAGAAATTATGAAAGGACTGAGTTGTTACTTTGACAAAGCACTGCCAGTGATGCTCTTGTACAATAATGAGCGTCAGCAGTACCGAGAAGCTTGTGCAAATGATATTGTTCCTTCTGCTATATACGGTGCTGAGCATTTGTTACGTCTCTTCGTTAAATTGCCAGAGTTATTGTTCCATGCTAACATTGAAGGCGATACATTGGTAGAACTCCAGGCACAAGTACTTGACTTTCTCAGGTTCTTGCGAAAAAATCAGAGAGCATTTTTCCTTTCTTCTTATCACGTCCAGGAAGATGTTGAGAACAGCAGCGACAAACGATTTTGCACATAA 921 0.4028 MGSSKTSSDVSDSSSSQTEIENHISASPYAEGEKVLAFHTACLYEAKVKQIEYKRKQWRFFLHYLGWKKSWDEWVGIDRLLKHTEENMRKKLTIDAEYGNEKNARKPRASSKGSNGARGRKRKNDSLVKEKTAVLPDKLVNFQIPPTLRKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRSKKSGPIADSVEEIMKGLSCYFDKALPVMLLYNNERQQYREACANDIVPSAIYGAEHLLRLFVKLPELLFHANIEGDTLVELQAQVLDFLRFLRKNQRAFFLSSYHVQEDVENSSDKRFCT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03647 306 CDD CBD_MSL3_like 33 89 - -
Vifa2g03647 306 Gene3D MRG domain 134 303 IPR038217 -
Vifa2g03647 306 MobiDBLite consensus disorder prediction 1 21 - -
Vifa2g03647 306 Pfam RNA binding activity-knot of a chromodomain 31 80 IPR025995 -
Vifa2g03647 306 SUPERFAMILY Chromo domain-like 27 160 IPR016197 -
Vifa2g03647 306 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 28 294 IPR008676 GO:0005634|GO:0006325|GO:0006355
Vifa2g03647 306 FunFam Chromatin modification-related protein EAF3 136 299 - -
Vifa2g03647 306 Gene3D - 12 111 - -
Vifa2g03647 306 MobiDBLite consensus disorder prediction 98 125 - -
Vifa2g03647 306 Pfam MRG 121 290 IPR026541 -
Vifa2g03647 306 PIRSF EAF3_MRG15 23 303 IPR008676 GO:0005634|GO:0006325|GO:0006355
Vifa2g03647 306 ProSiteProfiles MRG domain profile. 136 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03647 Vifa-Chr2 1063511845 1063516012 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03647 K11339 - gmx:100777259 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03647 2 1063511845 1063516012 Vifa2g03647 2 1063511845 1063516012 ECH