Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03567 ATGTGCAATCCTAGGATTGGGCTCTTTCTTATTGTAAGTTCAGCATTGTTGTGTGCTTTCTCTTTTGCAACAACCATTGAGTATGATACAAATGCCATTATCATCAATGGAGAACGACGAATAATAATATCAGGTGCGATCCACTATCCGCGTAGCACTTCACAAATGTGGCCAGATCTTATTAAGAAAGCAAAAGATGGTGGTCTTGATGCCATCGAAACATATATATTTTGGGACCTTCACGAACCTATTCGCCGCCAATATGATTTTTCCAAAAATCTAGATTTCATCAAGTTTCTAAAAAATGTTCACGAAGAAGGTCTTTATGTTGTGCTTAGAATTGGTCCATATGTTTGTGCTGAATGGAACTATGGAGGTTTCCCAATGTGGTTACACAACTTGCCAGGGATTCAACTAAGGACTGACAATGCAGTTTTTAAGGAGGAAATGAAAATATTCACAACAAAGATTGTGACCTTGTGCAAAGAAGCTGGATTGTTTGCACCACAAGGAGGACCAATCATTTTGGCTCAAATTGAGAATGAATATGGGGATGTCATAACTAACTACGGAGAAGATGGGAACACATACATTAAATGGTGTGCCCATATGGCTTTAGCTCAAAATGTAGGTGTCCCATGGATCATGTGCAAACAAAACAATGCCCCATCACCTATTATCAACACATGCAATGGCTATTATTGTGATGATTTCAAGCCAAACAATCCTAAAAGCCCCAAAATGTTTACAGAAAATTGGGTTGGTTGGTTCCAAAAATGGGGTGAAAGGAAGCCACATAGAACTGCTGAAGATGTAGCATTTTCAGTTGCACGTTTTTTTCAAAGGGGTGGTGTCCTCCAAAACTACTACATGTACCATGGAGGAACAAATTTTGGAAGAACCGCGGGCGGTCCGTATATTATCACAGCATATGACTATGATGCACCACTTGATGAATACGGTAATTTGAACCAACCAAAATGGGGACATCTTAAAAAACTCCATGCCGCCATAAAGTTAGGAGAGAAGGTTCTCACTAATGGAACTGTTACAGAGAATCAATACGGAGATTTAATATCTTTGACTACTTATGAAAATAATGCCACTGCACAAAAATTTTGTTTTTTGAGTAATTCACATAATTCTAAGGATGTTGAAGTTGATCTAGTACAAGATGGAAAGTACTATGTGCCTGCTTGGTCAGTGTCTATTCTCCAAGATTGCAACAAGGAAGTTTTCAACACTGCAAAGGTTGATGCACAAACAAATGTTTATGTGAAGAAACCATCTACAAAATTAGGAAACTCACTCATCTGGACATGGGCATCCGACCCCGTAGATGACACCTTGCAAGCAATAGGAACATTTAATGCATCTGAACTTTTGGAGCAAAAGAGTGTTACCGTTGATGCTAGTGATTATTTGTGGTACATGACGAAAGTTATAATCAATGAAACATCCATTTGGAATAATGCAACTTTGCAAGTGAACACATCAGGCCATGTTCTTCACGCCTATGTTAATGGACAATATATTGGCCCCCAGTGGGGAACACATGATAACCTTCGTTTTACATATGAAAGATTGGTTTCATTGAAACAAGGTACCAACATTATAAGTTTATTAAGTGGTACAGTTGGTCATGCAAATTATGGCGCATACTTTGATATGAAAGAAACTGGTATTGTTGGGGGTCCTGTGAAACTCATTGCAACCAATTCAGGAAATATTTTGGATTTATCAAAATCTAGTTGGTCATACAAAGTTGGATTAAATGGTGAGGCTAGAAGGTTCTATGATTCTAAAATTATAAACGAAGTTCAATGGAACATAAATAATGTTGTTATAGGAAAACCATTGACTTGGTACAAGACTACTTTTAAGACACCTGAAGGTAAAGAGCCTGTAATCTTGGATTTTATAGGCCTTACAAAAGGACATGCATGGGTTAATGGTCAAAGTATTGGAAGGTATTGGCCTACAATGGTGGCTGACAAAAATGGATGTGATACTAAATGTGATTATAGAGGAAATTATGGAGCTGATAAATGTTTGAGTGGTTGTGGAGAACCATCTCAGAGGTTTTACCATGTGCCAAGGTCATTCTTAAATAATGACACAAACAGTAACACACTGATTTTGTTTGAGGAAATGGGTGGAAGCCCCTTTAATGTGTCTGTACAAACAGTTGCAATTGATTTTATATGTGGAACAACAGATTATGGAAAAACCTTAGAATTAAAATGCCCGGATGGAAAAACTATTTCAGAAATCCAATTTGCGAGCTATGGAGAACCACAAGGAAAGTGTGGATCATTCCAAGTAGGTGAATGGGAATCACGTCATAGTGAGGCAGTGGTTGAAAAAGCATGTACTGGAAAACAATCATGTTCAATTAATGTGACAAGTTCCACATTTGGAATAACTAAAGGTGGCATGAATGGTCAGCTAGCTGTGCAACTCCTATGTGATGGCTCTGATCCTGAAGATAGTCGTGTACAATTTATTCACGTGTAG 2517 0.3798 MCNPRIGLFLIVSSALLCAFSFATTIEYDTNAIIINGERRIIISGAIHYPRSTSQMWPDLIKKAKDGGLDAIETYIFWDLHEPIRRQYDFSKNLDFIKFLKNVHEEGLYVVLRIGPYVCAEWNYGGFPMWLHNLPGIQLRTDNAVFKEEMKIFTTKIVTLCKEAGLFAPQGGPIILAQIENEYGDVITNYGEDGNTYIKWCAHMALAQNVGVPWIMCKQNNAPSPIINTCNGYYCDDFKPNNPKSPKMFTENWVGWFQKWGERKPHRTAEDVAFSVARFFQRGGVLQNYYMYHGGTNFGRTAGGPYIITAYDYDAPLDEYGNLNQPKWGHLKKLHAAIKLGEKVLTNGTVTENQYGDLISLTTYENNATAQKFCFLSNSHNSKDVEVDLVQDGKYYVPAWSVSILQDCNKEVFNTAKVDAQTNVYVKKPSTKLGNSLIWTWASDPVDDTLQAIGTFNASELLEQKSVTVDASDYLWYMTKVIINETSIWNNATLQVNTSGHVLHAYVNGQYIGPQWGTHDNLRFTYERLVSLKQGTNIISLLSGTVGHANYGAYFDMKETGIVGGPVKLIATNSGNILDLSKSSWSYKVGLNGEARRFYDSKIINEVQWNINNVVIGKPLTWYKTTFKTPEGKEPVILDFIGLTKGHAWVNGQSIGRYWPTMVADKNGCDTKCDYRGNYGADKCLSGCGEPSQRFYHVPRSFLNNDTNSNTLILFEEMGGSPFNVSVQTVAIDFICGTTDYGKTLELKCPDGKTISEIQFASYGEPQGKCGSFQVGEWESRHSEAVVEKACTGKQSCSINVTSSTFGITKGGMNGQLAVQLLCDGSDPEDSRVQFIHV 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03567 838 FunFam Beta-galactosidase 290 420 - -
Vifa2g03567 838 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 ProSiteProfiles SUEL-type lectin domain profile. 739 824 IPR000922 GO:0030246
Vifa2g03567 838 Gene3D - 733 827 IPR043159 -
Vifa2g03567 838 Gene3D - 591 732 - -
Vifa2g03567 838 SUPERFAMILY Galactose-binding domain-like 402 573 IPR008979 -
Vifa2g03567 838 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Vifa2g03567 838 SUPERFAMILY Galactose-binding domain-like 584 738 IPR008979 -
Vifa2g03567 838 Gene3D - 447 579 - -
Vifa2g03567 838 PANTHER BETA-GALACTOSIDASE RELATED 20 746 IPR001944 GO:0004553|GO:0005975
Vifa2g03567 838 SUPERFAMILY (Trans)glycosidases 25 339 IPR017853 -
Vifa2g03567 838 Pfam Beta-sandwich domain in beta galactosidase 345 418 IPR041392 -
Vifa2g03567 838 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Vifa2g03567 838 Pfam Galactose binding lectin domain 747 823 IPR000922 GO:0030246
Vifa2g03567 838 Gene3D Glycosidases 21 341 - -
Vifa2g03567 838 FunFam Beta-galactosidase 22 341 - -
Vifa2g03567 838 CDD Gal_Rha_Lectin_BGal 741 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03567 Vifa-Chr2 1038680429 1038682945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03567 6 823 Glycoside Hydrolase AT1G31740 50.060 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03567 - - psat:127079039 1202.19