Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03561 ATGGCAAAATTTTCTGTCTCCCCTCTCTGCTCTTCCCCCTCTCCTCGTCTTCAGCTTCACCGGCAACCATTCTCCACCGTTTCTCAACCAATCGCTCATCCCGCTTCTTCCGCCACCGATTCCAATTCCACTTTCACTTTCGCTACCACTTCCAATCTCACTCCCAAAGTCGTCGTCACCAGAGAACGCGGCAAAAACTCCAAGCTTATCAACGCCCTGGCCAAACATGAAATCATTTGTTTGGAGCTTCCACTCATTGAGCACCTACGGGGACCTGATTTTGACAGGCTTCCTTGTGCATTAAGTGATAATGCATTTGATTGGGTTATCATAACTTCTCCGGAGGCTGGTTCAGTCTTTCTGGAGGCATGGAAAACTGCTGGGATGCCCCGCGCCAGAATAGGCGTTGTTGGATCAGGTACTGCAAGCATTTTCAAGGAAGCTTTGCTGCCTTCAAACAATTCACTTGATGTTGCCTTTTCACCATCAAAAGCAACTGGAAAAGTTTTGGCTACAGAGCTTCCCAAAATCGGAAATAAAACCACCATTCTATATCCTGCTTCTGCAAAGGCTAGCAACGACATTGAGGAAGGGCTTTCAAGTCGCGGATTTGAAGTTACAAGGATGAATACATATACAACGGTACCAGTTCAACATGTTGACCAGATGGTTCTAAAGCAAGCGCTTGCTGCCCCTGTTGTTACAGTAGCTTCACCATCTGCAATTCGGGCATGGAAGAATCTCCTTTCAGATTTTGACTGGAGCAATTATGTTGCATGCATTGGAGAGACAACTGCTGCAATGTCAAGAAGATTAGGCTTCAAAAATGTGTTCCACCCAACACAACCAGGCCTTGAAGGCTGGGTGGAAAGCATCCTTGAAGCATTAGGATCCTATGATGAATTAGTGAGGTAG 915 0.4634 MAKFSVSPLCSSPSPRLQLHRQPFSTVSQPIAHPASSATDSNSTFTFATTSNLTPKVVVTRERGKNSKLINALAKHEIICLELPLIEHLRGPDFDRLPCALSDNAFDWVIITSPEAGSVFLEAWKTAGMPRARIGVVGSGTASIFKEALLPSNNSLDVAFSPSKATGKVLATELPKIGNKTTILYPASAKASNDIEEGLSSRGFEVTRMNTYTTVPVQHVDQMVLKQALAAPVVTVASPSAIRAWKNLLSDFDWSNYVACIGETTAAMSRRLGFKNVFHPTQPGLEGWVESILEALGSYDELVR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03561 304 FunFam Uroporphyrinogen-III synthase, chloroplastic 100 206 - -
Vifa2g03561 304 Gene3D - 99 206 IPR036108 GO:0004852|GO:0033014
Vifa2g03561 304 Pfam Uroporphyrinogen-III synthase HemD 68 290 IPR003754 GO:0004852|GO:0033014
Vifa2g03561 304 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 6 298 IPR039793 GO:0004852|GO:0006780
Vifa2g03561 304 Gene3D - 207 296 IPR036108 GO:0004852|GO:0033014
Vifa2g03561 304 SUPERFAMILY HemD-like 56 297 IPR036108 GO:0004852|GO:0033014
Vifa2g03561 304 CDD HemD 57 292 IPR003754 GO:0004852|GO:0033014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03561 K01719 - gmx:100808086 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03561 2 1037416344 1037421256 Vifa2g03561 2 1037416344 1037421256 ECH