Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03553 ATGCCATCAGTGCATTCTAGTCCTTTCTACCCAATGGAAAATCCAGCCTTAGCATCACTTCTCCGGCACACATCCGGCGAAAAGCGGAACAAATTCTCCGCCGGTGGGCTCTTAAAGATGTTCAAACTCTTCCCTATGTTAACATCAGGTTGCAAAATGGTAGCACTGTTAGGAAGACCGAGAAAGCCTATGTTAAAAGACAGTGCCACAACGGGAACAATCTTTGGTTACAGAAAAGGAAGGGTAATCATAGCAATACAAGAAGACACACGTCAAATGCCGATTTTTCTCATCGAATTACCAATGCTAACGACCGCGTTAAACAAAGAAATGTCATCTGATATAGTGAGAATCGCGCTGGAGAGCGAAACAAAGACGAATAAGAAGAAGCTGTTGGAAGAGTTTGTTTGGGCTGTGTATTGTAATGGTAAAAAAGTTGGTTATTCTATAAGGAGGAAACAAATGGGAGATGAAGAGCTTCAAGTTATGCAACATTTGAGAGGCGTGTCCATGGGAGCTGGGGTGTTACCTACCGCATCTGATCATAAGGATAGTTCTGATGGTGAAATGACTTATATGAGAGCAAGGTTTGAAAGAGTTATTGGTTCTAAGGATTCTGAAGCTTTTTATATGATTAATCCTGATAATAATATTAATAACGGTAATCAAGGACCTGAGTTTAGTATATTTTTTGTTAGAGCTCACTAG 708 0.4025 MPSVHSSPFYPMENPALASLLRHTSGEKRNKFSAGGLLKMFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVIIAIQEDTRQMPIFLIELPMLTTALNKEMSSDIVRIALESETKTNKKKLLEEFVWAVYCNGKKVGYSIRRKQMGDEELQVMQHLRGVSMGAGVLPTASDHKDSSDGEMTYMRARFERVIGSKDSEAFYMINPDNNINNGNQGPEFSIFFVRAH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03553 235 PANTHER PROTEIN MIZU-KUSSEI 1 27 233 IPR006460 GO:0010274
Vifa2g03553 235 Pfam Protein of unknown function, DUF617 71 233 IPR006460 GO:0010274
Vifa2g03553 235 NCBIfam uncharacterized plant-specific domain TIGR01570 70 233 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03553 Vifa-Chr2 1034818819 1034819526 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03553 - - mtr:11420891 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03553 2 1034818819 1034819526 Vifa2g03553 2 1034818819 1034819526 ECH