Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03539 ATGACTGGTGTTGATCAACCTCAATCTAATCCATATGTCTCTCCCGCGCCTGTTCCCGCACCCACACCTGCCAAGAATACTTTAGATTCGGTGAAAGATGTTCTTGGTAAATGGGGAAAGAAAGCCGCTGAGGCTACCAAGAAAGCCGAGGATCTTGCTGGAAATATGTGGCAGCACTTGAAAACGGGTCCTAGTTTTGCGGATGCTGCTGTGGGGAGGATTGCCCAGGGAACAAAAGTTCTCGCAGAAGGACCTGTCATGGGAGTCTTATACTTGTCATCTGCAAAGCTCGCATTTTGTAGTGATAACCCACTCTCTTACCAAACTGGTGACCAGACACAATGGAGCTATTATAAGGTGGTTATTCCATTGCATCAGCTGAGAGCAGTGAACCCATCCACAAGCAAAGTCAACCCATCCGAAAAATTTATACAGATTATCTCGGTAGACAACCATGAATTTTGGTTTATGGGCTTTGTGAACTACGACAGCGCTGTTAAACATATTCAAGAAGCATTGCAGTCTCGCTGA 531 0.4576 MTGVDQPQSNPYVSPAPVPAPTPAKNTLDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGPVMGVLYLSSAKLAFCSDNPLSYQTGDQTQWSYYKVVIPLHQLRAVNPSTSKVNPSEKFIQIISVDNHEFWFMGFVNYDSAVKHIQEALQSR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03539 176 PANTHER GEM-LIKE PROTEIN 2 20 84 IPR037848 -
Vifa2g03539 176 Gene3D - 73 175 IPR011993 -
Vifa2g03539 176 MobiDBLite consensus disorder prediction 1 27 - -
Vifa2g03539 176 Pfam GRAM domain 84 175 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03539 Vifa-Chr2 1029003035 1029021961 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03539 - - aprc:113865936 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03539 2 1029003035 1029021961 Vifa2g03539 2 1029003035 1029021961 ECH