Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03531 ATGTCCTTTTCCACTCCGACACTCAACTCCTCCTCTTCCAGACCCTTCATCTCCACCTCCACCCTACGACGTCGTTTACCCTTTGTCGGCGCGTTTTGCATGCTCACTTTCGGACTCACCAATTTCTACACACCCTTGTGTTCTTCTGCCCTCAAAACGGGATCCAAATTGGGTAGCAGGTTTTCGACTAAGAGCAGCAACTTTATTCAAATGGAAGGGAATACTAGTAACACCACTGTTCCAAGCATTGTTGTGTATGTCACTGTTCCCAACAAAGAAGCTGGTAAGAAATTGTCTGAGAGTATTGTCAAGGAGAAACTTGCAGCTTGTGTTAATAGGGTACCGGGTATAGAATCAGTGTATCTATGGGAGGGAAAGATCCAAACTGATTCTGAGGAACTTCTTATAATCAAGACCAGGCAATCTCTTTTGGAAGCACTGACAGATCATGTCAAAGCAAATCATGAATATGATGTACCAGAGGTAATCTCCTTACCCATCACTGGGGGCAGTCTCAAATATTTAGAATGGTTAAAAGAGAGCACAAGGGAGTGA 555 0.4396 MSFSTPTLNSSSSRPFISTSTLRRRLPFVGAFCMLTFGLTNFYTPLCSSALKTGSKLGSRFSTKSSNFIQMEGNTSNTTVPSIVVYVTVPNKEAGKKLSESIVKEKLAACVNRVPGIESVYLWEGKIQTDSEELLIIKTRQSLLEALTDHVKANHEYDVPEVISLPITGGSLKYLEWLKESTRE 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03531 184 SUPERFAMILY GlnB-like 82 183 IPR011322 -
Vifa2g03531 184 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 46 184 IPR004323 GO:0010038
Vifa2g03531 184 FunFam Protein CutA 1, chloroplastic 71 184 - -
Vifa2g03531 184 Gene3D - 74 184 IPR015867 -
Vifa2g03531 184 Pfam CutA1 divalent ion tolerance protein 83 180 IPR004323 GO:0010038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03531 Vifa-Chr2 1024389459 1024392005 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03531 K03926 - gmx:100792337 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03531 2 1024389459 1024392005 Vifa2g03531 2 1024389459 1024392005 ECH