Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03521 ATGAACCATAAATTGGTTATTACCTTAACACTTTGCTATGTAATTTACATATGCAAGAGCAATGCTATTGATCCATGTTCATCTCAACCAGATAACTCCGATCTCAACGTGATTCCTATGTATGGAAAATGCTCACCATTCAACCCACCAAAACCAGATTCATGGGACAACAGAATCATAAACATGGCCTCCAAAGACCCAGCCCGAATGAGCTACTTATCATCATTAGTAGCCCAGAAAACCGCCTCTTCATCTCCCATCGCTTCGGGCCAGGCTTTTAACATCGGCAACTACGTTGTCCGTGTCAAAATCGGAACACCAGGTCAACTTCTGTTCATGGTCCTTGACACAAGTACCGATGAGGCTTTTGTCCCTTCCTCCGGCTGCACCGGTTGTTCCGCTTCCGCCACAATTTTCTCCCCGAACTCCTCCACTAGTTTTGTCCCGTTGGATTGTTCCGTTCCACAATGTGGTCAGGTCCGCGGGCTTTCATGCCCAGCCACAAGCTCCGGCGCGTGTTTATTCAACCAATCTTACGCCGGTTCTTCTTTCTCTGCCATACTCGTTCAAGATTCACTTAGATTAGCTAAGGATGTTATTGCTAACTACTCTTTTGGAAGCATTAACGCTATCTCGGGTGCTTCGATTCCGGCCCAAGGGCTTTTGGGCTTGGGCCGTGGGCCGTTATCTTTATTATCTCAATCCGGATCAATTTACTCAGTTAGAGACGAGTTTAGGAAACAAGTGACAGGACAATTTTCAAGCTTAGGAGCATTCGACACGTGTTTCGTGAAAACTTATGAAACATTAGCACCAGCTGTTACATTGCATTTCACGGATTTGGATCTGAAATTGCCAATGGAAAATAGTTTGATTCATAGCAGTTCTGGTTCGTTGGCTTGTCTTGCAATGGCAGCTGCACCGAGTAATGTGAACTCTGTGTTGAATGTGATTGCTAATTTTCAGCAACAGAATTTGAGGGTTTTGTTTGATACCGTGAATAGTAAGGTTGGTATTGCCCGTGAGGTTTGTAACTAG 1038 0.447 MNHKLVITLTLCYVIYICKSNAIDPCSSQPDNSDLNVIPMYGKCSPFNPPKPDSWDNRIINMASKDPARMSYLSSLVAQKTASSSPIASGQAFNIGNYVVRVKIGTPGQLLFMVLDTSTDEAFVPSSGCTGCSASATIFSPNSSTSFVPLDCSVPQCGQVRGLSCPATSSGACLFNQSYAGSSFSAILVQDSLRLAKDVIANYSFGSINAISGASIPAQGLLGLGRGPLSLLSQSGSIYSVRDEFRKQVTGQFSSLGAFDTCFVKTYETLAPAVTLHFTDLDLKLPMENSLIHSSSGSLACLAMAAAPSNVNSVLNVIANFQQQNLRVLFDTVNSKVGIAREVCN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03521 345 Gene3D Acid Proteases 81 197 IPR021109 -
Vifa2g03521 345 ProSiteProfiles Peptidase family A1 domain profile. 98 345 IPR033121 -
Vifa2g03521 345 Gene3D Acid Proteases 228 345 IPR021109 -
Vifa2g03521 345 PANTHER ASPARTYL PROTEASES 240 338 IPR001461 GO:0004190|GO:0006508
Vifa2g03521 345 Pfam Xylanase inhibitor N-terminal 98 245 IPR032861 -
Vifa2g03521 345 SUPERFAMILY Acid proteases 91 344 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03521 Vifa-Chr2 1022116439 1022117758 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03521 88 238 Miscellaneous Gene Families AT1G77480 31.138 3.62e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03521 - - gmx:100816307 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03521 2 1022116439 1022117758 Vifa2g03521 2 1022116439 1022117758 ECH