Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03501 ATGAAGAAGACAACTCGCAGATCCAAACAACCAAGTCCCGTTGTTGCCGCAGCTTCCGACGCAAACGAAAAGCAACACTTAGAAGAAAGGATCCGCGAACTTGAACAAGCGAACAAAGCGTATCAGACTGAGATTGCGGAATTGAAGGAAGGAAAGGGGAATGATTCTTCTTCAGGTTCTAATGATGGAGTTGAGAAGCTTAAGAAAGATTATCTTCAGAAGCTGAATTTACTGGAAGATCAGGTATCAGAATTGAAGAAAAAATTGGGATCTCAATCCCAATTTTCGACTCATAGGAAAAGAGCGGATGAATCAACTAGGCAATTGCAGTATGAGAATCAGAATTTGAAGGCTCAAAAGGCCAAACTGCAATGTACGATGAAGTTGGAGTCTGTGCGGTTTAGGTTAAGCAAGGCCTTACTTGAAAAAGAAGTTCTTCAGCTTAAGAAGGAACTAAGACGGAATGGAATCAAGACCCACAGTTTGCTGACTTCTAATGAGATGCTTAAAATGGTAGTGCAACGGAAGACTGAGGAAGCTTCTGCTTCTATCAAGCGTCTAAGAGATATGATAGCTGCACGAAAAGCTATATCAAATCGATCATCAGGTGCCAAAAATAAAAGTGGTCAAGTAATTCAGGATGCTGAGCATGAACTTGAAGTCTCAACTCATTTGCACAAGTTATGTTCTCAATATGAATCCAAAATCGCAAAGATGACTGGGGAGATTGCACAGCTGAAAGAAGAACTTGAAATGCAGAGGCAGGACAATTCAAAGTCTGAATTACAGGAACAAGACCTTGGCAGCCCGGAGAAGGATTATGATGATATTCAAGATTTAAAGGAACAAGTAAACAACCTTAGTGGTCTGCTTAAAGAACTACAATTGCAGAAGGAAAAAAATGAACCCAGGCATAAGAGCCAGGATCTGGCCAATGCTCTTTCTGAAGCAAGTTATGCTACGGCAAAAATGGATACCCCTGAAATGATTAGTTCAAATGAAAATAGTGTTAAGAGGGGGAGAGCAGGTGAAGGGCTTTGCTGTTCTTGTAGTAAGAAGTCCTTATGCAAAACTACAAAGTGCAAATGCCGATCCAATGGTGGGAGCTGTGGACCATCATGTGGCTGCTCACTTTCCAAGTGCACAAATAGGGAACTATGCACCTTGCCAGAAAATGAGTCACTAAAATTAGAGAATTCAGGATGCTCTACAAACAAAGATGGTGAAGCTGTGATCGCTTCTGAATGTGCTAAACTACTCCAGAATGCACTTGTTCAAAAACCTGCCAACCAGGAGCCTAAAAAGAAGCCATTGTGTGACATTCAGAACTCAATGGGTAACATGGATGCTCGAAAGAAAGGCAGGAAAATGAATGTTCGGAAGCCAGTAATTCACCTTGTTACTAAGGATCCAATGTCCTCGTCGCCATAA 1431 0.4151 MKKTTRRSKQPSPVVAAASDANEKQHLEERIRELEQANKAYQTEIAELKEGKGNDSSSGSNDGVEKLKKDYLQKLNLLEDQVSELKKKLGSQSQFSTHRKRADESTRQLQYENQNLKAQKAKLQCTMKLESVRFRLSKALLEKEVLQLKKELRRNGIKTHSLLTSNEMLKMVVQRKTEEASASIKRLRDMIAARKAISNRSSGAKNKSGQVIQDAEHELEVSTHLHKLCSQYESKIAKMTGEIAQLKEELEMQRQDNSKSELQEQDLGSPEKDYDDIQDLKEQVNNLSGLLKELQLQKEKNEPRHKSQDLANALSEASYATAKMDTPEMISSNENSVKRGRAGEGLCCSCSKKSLCKTTKCKCRSNGGSCGPSCGCSLSKCTNRELCTLPENESLKLENSGCSTNKDGEAVIASECAKLLQNALVQKPANQEPKKKPLCDIQNSMGNMDARKKGRKMNVRKPVIHLVTKDPMSSSP 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03501 476 Coils Coil 277 300 - -
Vifa2g03501 476 Coils Coil 229 263 - -
Vifa2g03501 476 MobiDBLite consensus disorder prediction 45 64 - -
Vifa2g03501 476 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 21 263 IPR027640 GO:0003777|GO:0007018
Vifa2g03501 476 MobiDBLite consensus disorder prediction 251 273 - -
Vifa2g03501 476 Coils Coil 61 88 - -
Vifa2g03501 476 Coils Coil 99 126 - -
Vifa2g03501 476 Coils Coil 17 51 - -
Vifa2g03501 476 MobiDBLite consensus disorder prediction 1 24 - -
Vifa2g03501 476 MobiDBLite consensus disorder prediction 427 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03501 Vifa-Chr2 1015349951 1015353309 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03501 - - cam:101512646 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03501 2 1015349951 1015353309 Vifa2g03501 2 1015349951 1015353309 ECH