Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03498 ATGTTGCGAAGAGCTGCAACCAATGCATATTCATGGTGGTGGGCTAGCCACATTAGAACCAAGCAATCGAAATGGCTCGAACAAAGTCTCCAAGATATGGAGGAGATAGTAGCTGAAACGCTCAAAATCATCGATGATAGTGGCGACTCATTTGCCCAAAGGGCTGAAATGTACTACAGAAAAAGACCAGAACTGATAAATTTTGTGGGAGAAGCCTTTAGAGCATATAGAGCATTAGCCGAGAAATATGATCATCTGTCAAAAGAACTTCAAAGCGCGAATCGCACAATTGCCACCGTCTTCCCGGAACAAGTCCATTACAGAATAGACGAAGAAGAATTCGAGGACGCGGAATGTGGTTTTCATGGAACCAATTTATCGTCTGCTGACATTAATAACCAAACAGAAAAACAATGTAACATTCCTAAACCTCCGAGTATCCCGAAGAAGGTTTTTCGAAGTCCATCTATGTTGCTCTCAAGAAAAGGAACAACTAAAAAGAATTTAAGCCCTGCAAAATCTGTTTCAAATTTAGCGGTTCAATGTTCAGGTTTGAGCGAGGTTGAAGCATTAGCCGAAGTAGACAAGCTTCAGAAAGATATTTTGGCTTTGCAGACTGAGAAAGAGTTTGTAAGGAGTTCATATGAACATTCCTACGGAAAGTATTGGGAAATCGAAGACAAAATTACCGGAATGCAAAAAAGAGTTTATGCCTTGCAAGACGAATTCAGCATTAGTACTGTCATTGAAGATAACGATGCTAGAGCTTTAATGGCCGCCACAGCTTTAAATTCATGTAAAGAAACTCTTAGTAAGTTGAAAGAAGTACGATCACAATCATCAGAAGAAGCTAGAGAAACATACAAAAAAGTTAAGGAAGCTCATTACAAATTTGAAAACCTTAGAGGTAACTTCATTTCCAAGCAAACAAATCAGCAAGACGATGAAACAGATTCAAAAAGCAAAGATGAAGAAGAGATAGCACTTAGCTTGGAAGAAGATACACTTGAGCATGATATAGGGATGTTGCAAGAACGGATTAAGGAAAAGCTCGAGGAAGATTCAGGAAACTCGTTTACGATGATTGCAAAGATGATTGATGAGCTTGTAAGTAAAGTAGTGAGTTTGGAAACAAAAGTTACTTCTCATAATGGATTGGTAAAGAGATTGATATCAGAAGCAGATGAACTTCAAACAAATATACAAAGCTTAGAAGAGGATAAGGAAGTGCTTATGGAAGATTCGGAAAACAGTAACATGAGGATGAAAGAATTGGAAGATGAACTGAAGAGAGTTAAAACTCTCAACCAAAGTGTCAAAAGCCAAGATAAGAATCTCCAAACACATTTTCATGAAGCTAACTTTAATCTCGAGCATCTTTCAGGAAGATTGAAAAATGTGAAGCTAGACGAGGAAGACGACAATTTGGTACTTAACAAGAACACAAGTTTTTCAGATGGGAAACTAAGTGAGGATTCCGAAAAGCATGTAGATGAACTTTTTAGTGATAATTTAGAAATCATGAATGATCATGTCGAGACAACAAATGAGGATAAGGAAGATCATGATGCAAATATTGATGAAGTCGTAAACGAAGATGATAAGACTGAAGGGATGTCGGAGCTAACACAGCAGGATAAGGATGATTTGTCTGAGACGACGAGTAAAGTTGAAGTCGAACCACTTGATTTAGAACCTGTGGAGGAAAAAGATCTAACTAGCTTGAATCAGATGCTTGTAAATGGATCAGGTGTCAGAGAAAAGATTATGTTGGAAGAGTACACGTCAGTTTTGAAGAACTATAACGATGTATCGGACAAGCTCAACAACGTAGAAAACAAAAATCGGAACAGCATTTTCGAATTGGCACTTCAGGTGAGGGAATTGAAGAACGTAGTTGCCACTAAGGATGAAGAGATACACATTTTAAATAAGAAGCTGACATCTTCAGAGCCAGATGAAAGTCCTCGCGTCACTCTCTCCGAAGAAGCGCCTCTTGAAAACGCGGATCAAGGAGATAACACACAGGGTCCCGAAACTCTATCTTCAGAAATAGCTAGCACTTCTACTGAAGATCAACCGCAACCTGTTGAAAACACGGGACACTTCGACGTGTCATCTATTGGAAAAACAAGATTAATTGTGGTTCGAGAAAAACAGATTGACAAGCCACATTCTCTTTCACCTTTAGAAAGGAAACTCCGTTTGGAAATCGATGATTTACTCGAGGAGAATTTAGAGTTTTGGTTAAGGTTCAGCACTTCGGTTCATCAGGTTCAACAGTTCCAAAAATCTTTACTAGACTTAAAAGCAGAACTAAGAAAAGCAAAGCATAATAACCTTTTTTCAGAAAACAAGATCTCATCAAAAGTTATACAATCAGAAATAAAACCAATATTTATGCATTTGAGAGAAATACGGACCGAGTTATCACTATGGTTAGATCACAATGAAGTGTTGCAGGATGATTTACAAGCTAGACATCCATCGTTGTGCAGCTTACAAGATGAAATAGCAAGTGCAGCGAATCCAGATACATCCTTGAAGAGAGTTGAACTCAGCGAGTATCAAGCTGCAAAGTTTCAAGGCGAAGTTCTCAACGTGAAACAAGAGAGCAACAAGGTTTCTAGTGAACTACAAGAAGGTTTGAGCTATGTAACAGGACTAAAAATCGAAGTCGAGAAAATACTCGAAGAATTGAGTCAAATAATGGGAGTTAACAACCCTGATCACATAAAACATTCATCATCGAGTCGCACTAGATTACCTTTGAAGTCTTTCTTATTTGGAATCAAGTTGAAGAAACAAAAACAATCAATGTTTTCATGTGTTAATCCAACATTGCAGAAACAATACAGTGATCTTACAGCAGCTAATGATGCACCAATATAG 2892 0.3811 MLRRAATNAYSWWWASHIRTKQSKWLEQSLQDMEEIVAETLKIIDDSGDSFAQRAEMYYRKRPELINFVGEAFRAYRALAEKYDHLSKELQSANRTIATVFPEQVHYRIDEEEFEDAECGFHGTNLSSADINNQTEKQCNIPKPPSIPKKVFRSPSMLLSRKGTTKKNLSPAKSVSNLAVQCSGLSEVEALAEVDKLQKDILALQTEKEFVRSSYEHSYGKYWEIEDKITGMQKRVYALQDEFSISTVIEDNDARALMAATALNSCKETLSKLKEVRSQSSEEARETYKKVKEAHYKFENLRGNFISKQTNQQDDETDSKSKDEEEIALSLEEDTLEHDIGMLQERIKEKLEEDSGNSFTMIAKMIDELVSKVVSLETKVTSHNGLVKRLISEADELQTNIQSLEEDKEVLMEDSENSNMRMKELEDELKRVKTLNQSVKSQDKNLQTHFHEANFNLEHLSGRLKNVKLDEEDDNLVLNKNTSFSDGKLSEDSEKHVDELFSDNLEIMNDHVETTNEDKEDHDANIDEVVNEDDKTEGMSELTQQDKDDLSETTSKVEVEPLDLEPVEEKDLTSLNQMLVNGSGVREKIMLEEYTSVLKNYNDVSDKLNNVENKNRNSIFELALQVRELKNVVATKDEEIHILNKKLTSSEPDESPRVTLSEEAPLENADQGDNTQGPETLSSEIASTSTEDQPQPVENTGHFDVSSIGKTRLIVVREKQIDKPHSLSPLERKLRLEIDDLLEENLEFWLRFSTSVHQVQQFQKSLLDLKAELRKAKHNNLFSENKISSKVIQSEIKPIFMHLREIRTELSLWLDHNEVLQDDLQARHPSLCSLQDEIASAANPDTSLKRVELSEYQAAKFQGEVLNVKQESNKVSSELQEGLSYVTGLKIEVEKILEELSQIMGVNNPDHIKHSSSSRTRLPLKSFLFGIKLKKQKQSMFSCVNPTLQKQYSDLTAANDAPI 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03498 963 PANTHER PROTEIN NETWORKED 2D 1 958 - -
Vifa2g03498 963 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Vifa2g03498 963 Coils Coil 76 96 - -
Vifa2g03498 963 MobiDBLite consensus disorder prediction 668 703 - -
Vifa2g03498 963 Coils Coil 759 786 - -
Vifa2g03498 963 MobiDBLite consensus disorder prediction 645 660 - -
Vifa2g03498 963 Coils Coil 187 207 - -
Vifa2g03498 963 Coils Coil 387 442 - -
Vifa2g03498 963 Coils Coil 626 646 - -
Vifa2g03498 963 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Vifa2g03498 963 MobiDBLite consensus disorder prediction 531 555 - -
Vifa2g03498 963 MobiDBLite consensus disorder prediction 645 703 - -
Vifa2g03498 963 Coils Coil 512 532 - -
Vifa2g03498 963 Coils Coil 333 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03498 Vifa-Chr2 1014284307 1014287759 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03498 - - psat:127088271 1560.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03498 2 1014284307 1014287759 Vifa2g03498 2 1014284307 1014287759 ECH