Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03478 ATGGAAGTTTATTCATATTCATATTCATATTCAACAACCTCGTTAATCCCTTCATTCCCTTCTCATTCTTCATTCTCTCGATTCCATTTCCAAAATCGCAAACTCAACAACAACACTCTAAACCTAATCCCAATGTCTTCTTCGTCACTTCCTACAAAATCAGCCTTCAATTTACCTTCCATTTCCAGATTCAACCGCGCACGTCGAACCGCAATCAAATTCCGCGGTTCGTCTTCATCGGATTGGATCAATTCTTCTTCTAATCGAACCGTTTTGTTAACCTCCGGTATTACTGTTAGTTTAGCTGTTGCGAATCGCGTGCTTTATAAACTCGCTCTTGTTCCGTTGAGTAGTTACCCGTTTTTTCTTGCTCAGTTTACTACTTTTGGGTATGTTGTTATATATTTTAGCATATTGTATGTGCGATACCGGTTAGGGATTGTTACCAAGGAAATGCTTGCGATTCCGAAATGGAGATTTTTTGTTATTGGATTTTTAGAAGCTTTGGGATTGGTTGCTGGAATGTCTTCTGCAGCAATACTTCCTGGACCAGTCATACCCATATTGAATCAGTCTTATTTAGTTTGGCAGTTAACGTTTTCCACTCTTATCCTGAGGAGAAGGTACTCAATCAGCCAAATTGTTGGGTGTTTACTAGTAGCTGCTGGTGTCGTGGTTGCTATTTCAAGTGGCTCTAATGCAGGTCAGATGCTCTCTAAAGTTGATTTCTTTTGGCCAGCATTGATGATAGTTTCTTGTGCCTTTCAAGCCGGGGCTTCGATAATCAAGGAGTTTGTTTTTCTTGATTCTTCCACTCGATTAAAGCAGAAGTCGTTGGATATATTTGTGGTCAATTCTTTTGGATCTGGGTTCCAGGCTCTTTTCGTACTTCTCTTTCTACCTTTAATCTCTAACTTGAAAGGAATACCATTTGCTCAACTGCCTTCATATCTTAAAAGTGGTGCTGCTTGCTTTCTAAACATTGGAGCTGATAAAACAGGTTGTGATGGTGCTCCCTTGCTTCCACTGCTTTACGTAATTACCAATCTGGCATTCAATATATCCCTGCTTAGCGTACTGAAGCGTTCTTCTGCAGTTGTTGCTTCTCTTGTGTTAATGTTGTCAGTGCCAATTTCTGTTTATACTCTTTCCCTTCCATTACCATATCTTCCCGAGGGAGGAACAGTCTTGAGTCCATTTTTTCTGCTTGGCTGTGCAATTCTTGTATGTGGGCTTTACACATACAACACATCCCGACCTGCAAAGAATAGTGCAGAAGCTGAATGA 1287 0.404 MEVYSYSYSYSTTSLIPSFPSHSSFSRFHFQNRKLNNNTLNLIPMSSSSLPTKSAFNLPSISRFNRARRTAIKFRGSSSSDWINSSSNRTVLLTSGITVSLAVANRVLYKLALVPLSSYPFFLAQFTTFGYVVIYFSILYVRYRLGIVTKEMLAIPKWRFFVIGFLEALGLVAGMSSAAILPGPVIPILNQSYLVWQLTFSTLILRRRYSISQIVGCLLVAAGVVVAISSGSNAGQMLSKVDFFWPALMIVSCAFQAGASIIKEFVFLDSSTRLKQKSLDIFVVNSFGSGFQALFVLLFLPLISNLKGIPFAQLPSYLKSGAACFLNIGADKTGCDGAPLLPLLYVITNLAFNISLLSVLKRSSAVVASLVLMLSVPISVYTLSLPLPYLPEGGTVLSPFFLLGCAILVCGLYTYNTSRPAKNSAEAE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03478 428 Pfam CRT-like, chloroquine-resistance transporter-like 92 415 IPR013936 -
Vifa2g03478 428 PANTHER PROTEIN CLT2, CHLOROPLASTIC 82 424 IPR013936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03478 Vifa-Chr2 1005684005 1005690411 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03478 - - ccaj:109802647 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03478 2 1005684005 1005690411 Vifa2g03478 2 1005684005 1005690411 ECH