Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03463 ATGGGGAGCATCGATAGAGCCAATGATATTGACAACACTCTTATCCAATCACTGTTGCAAAAACAGGTTTCAGAGGAAGAAGAAGAAATATTTGGGAAGAAGCTATGGATTGAAACGAAGAAATTATGGATGATAGTGGGTCCCGCTATCTTGAGCAGCATCGCATCATTCACCATGAACGTGGTTAGTCAAGCCTTCGCGGGACACCTAGGTGAAGTTCAACTCGCCTCCATCACCATCGCCAACACTGTCATCGTTGGCTTCAACTTTGGCCTCCTCTTGGGAATGGCAAGTGCGTTGGAGACACTTTGTGGACAAGCGTTTGGTGCAAAACGACATAACGTGTTAGGAATATATCTGCAAAGATCATGGATTGTTCTCTTCTTTCCTCTTCAGAGGTTTCTACAGTGCCAGCTGAAAACAGGTGTGATTGCATGGGTTTCTTTGTTGGGTTTAGTGGTGAATGTTGTATTGAGTTGGTTGTTGGTTTATGTTTGGGATTTTGGGCTTATTGGTGCTGCAATAGCTTTGGATGTTTCATGGTGGGTATTGGTAATTGGGATGTTTGGGTACACAGTTTGTGGGGGTTGTCCTTTGACTTGGAATGGTTTTTCAATGGAAGCATTTTCTGGCCTTTGGGAATTCTTCAAACTCTCTCTTGCTTCAGGGGTGATGCTTTGTTTAGAGAATTGGTATTACAGGATACTGCTGCTTATGACAGGTCAGTTGGAAAACGCAACAGTTGCTGTTGATGCATTGTCTGTATGTATGACTATCAATGGATGGGAAATGATGATTCCATTTGCCTTCTTTGCCGGTACCGGGGTGCGGGTGGCGAATGAACTTGGAGCAGGAAAAGCAAAATCAGCAAAATTTGCAATGCAAGTATCAGTGATACAATCAACAGTGATCGGATTAATCTTCTGTGTTCTCATAATTATATTTCAGAGACAGTTTGCATACATTTTTACCTCGAGTCCTTCTGTTCTTCAAGCTGTTAACGACATGTCAATCCTCTTGGGAGTCACTATTCTTCTCAATAGTGTTCAACCTGTTCTATCAGGTGTAGCTGTTGGTTCGGGATGGCAAATATTTGTGGCATACATAAATATTGGATGTTACTATCTAATTGGTCTCCCCCTTGGAATTATCATGGGATGGGTTTTCAACACTGGTGTTGCAGGCATATGGGGTGGGATGATATTTGGTGGTACATTAATTCAAACATTGATACTCATCATAGTAATAGTACGGTGTGATTGGAAAAAAGAGGCAGATAAAGCTGGCTCACATGTAAACAAGTGGTCTATAATTAAACCTAATGACCAATTGGAGATCATTTATTAA 1347 0.4157 MGSIDRANDIDNTLIQSLLQKQVSEEEEEIFGKKLWIETKKLWMIVGPAILSSIASFTMNVVSQAFAGHLGEVQLASITIANTVIVGFNFGLLLGMASALETLCGQAFGAKRHNVLGIYLQRSWIVLFFPLQRFLQCQLKTGVIAWVSLLGLVVNVVLSWLLVYVWDFGLIGAAIALDVSWWVLVIGMFGYTVCGGCPLTWNGFSMEAFSGLWEFFKLSLASGVMLCLENWYYRILLLMTGQLENATVAVDALSVCMTINGWEMMIPFAFFAGTGVRVANELGAGKAKSAKFAMQVSVIQSTVIGLIFCVLIIIFQRQFAYIFTSSPSVLQAVNDMSILLGVTILLNSVQPVLSGVAVGSGWQIFVAYINIGCYYLIGLPLGIIMGWVFNTGVAGIWGGMIFGGTLIQTLILIIVIVRCDWKKEADKAGSHVNKWSIIKPNDQLEIIY 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03463 448 CDD MATE_eukaryotic 38 427 IPR045069 GO:0042910|GO:1990961
Vifa2g03463 448 PANTHER MULTIDRUG RESISTANCE PROTEIN 127 421 - -
Vifa2g03463 448 NCBIfam MATE family efflux transporter 125 397 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vifa2g03463 448 Pfam MatE 48 128 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vifa2g03463 448 Pfam MatE 223 383 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03463 Vifa-Chr2 1000755421 1000760782 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03463 K03327 - gmx:100500204 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03463 2 1000755421 1000760782 Vifa2g03463 2 1000755421 1000760782 ECH