Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03460 ATGGCCCATCAAAAGAAAAGGCTCAAAACTCTCGCAAACATTCTCAAAGACAAAGCTTCAGTAATCTACGCATCTCTCTCCGTCAAACGCCACGTCTCCTCCCTCCACATCAAAATCCTCCGCGCCACTTCCCACAGCCTCTCATCACCACCCTCCGAGTCACAAATCGCCGCCGTCCTCTCCATCGGCAACACCTCTTACTCTCTCCCTCGCGCGACCATCAACTCCCTCATGGACCGCCTCCACGGCACCAAGAACGCTACGGTCGCAATCAAATGTCTCTTCACTCTCCACCACATAACTATCAAAGGACCGTTCACTCTTAAAGATCAGCTTTCTTGTTACCCTTCTTACGGTGGTCGAAATTTTCTTAATCTTTCTGCTTTTCGTGATGACTCGGATTTTGAATCGGTGCAACTCAGTTCTTGGGTTCGTTGGTATAGTGCTGTTCTTGAACAGTTTCTAACCATTTCAAGAATATTAGGTTATTACCTGAATTCCAATTCTATAAAGAATGATTCGAATGATTCGGTTATGATGATGAAGTTGTCCAATGCTGATTTGTTGTATAAACTCGAAGCTTTGATTGTTTTTGTTGAGAAAGTTAGTGATGTTCCGGAATCGTTGGATCTTCAGAGGAATGAACTGGTTTATGAGATAGTGAGAATGGTTGGTGAAGATTATAGAAACGTGCAGGGTGAGATATTGATGAGATTGGAGGAACTTGGGAAGAGGATAGAGAGAGTTGAGGATGTGGGTGAGTTGAACGAGTTGCTGAGTTATTTGAGGAGATTGGAAGAGAGTAGAGAGAAGCTTGTGGTTTTGTTTGTGAATAGAAGGAAGAATGACGGGTTTTGGGAGATGGTGAGAGAGATGAAGATGAAAGGGTTGGAAAAGAAGAGAGAGATTGAAGGGAGGTGGCTTACGGTGGTGAGTAGGAACACGCTGGCGGCGGCGGCTGAGTTGACTCGGTGTACGAACCCGTTTCTTGAACCGGGGGAATATTTTCCGGTCCCACACTTGAGTTTTGCAACGGTAAGATGA 1044 0.4531 MAHQKKRLKTLANILKDKASVIYASLSVKRHVSSLHIKILRATSHSLSSPPSESQIAAVLSIGNTSYSLPRATINSLMDRLHGTKNATVAIKCLFTLHHITIKGPFTLKDQLSCYPSYGGRNFLNLSAFRDDSDFESVQLSSWVRWYSAVLEQFLTISRILGYYLNSNSIKNDSNDSVMMMKLSNADLLYKLEALIVFVEKVSDVPESLDLQRNELVYEIVRMVGEDYRNVQGEILMRLEELGKRIERVEDVGELNELLSYLRRLEESREKLVVLFVNRRKNDGFWEMVREMKMKGLEKKREIEGRWLTVVSRNTLAAAAELTRCTNPFLEPGEYFPVPHLSFATVR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03460 347 ProSiteProfiles ENTH domain profile. 27 165 IPR013809 -
Vifa2g03460 347 FunFam Putative clathrin assembly protein At4g40080 7 164 - -
Vifa2g03460 347 Gene3D - 6 163 IPR008942 -
Vifa2g03460 347 CDD ANTH_N_AP180_plant 35 158 - -
Vifa2g03460 347 SUPERFAMILY ENTH/VHS domain 33 162 IPR008942 -
Vifa2g03460 347 Pfam ANTH domain 35 219 IPR011417 GO:0005543
Vifa2g03460 347 PANTHER CLATHRIN ASSEMBLY PROTEIN 9 303 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03460 Vifa-Chr2 1000051794 1000052837 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03460 - - gmx:100788852 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03460 2 1000051794 1000052837 Vifa2g03460 2 1000051794 1000052837 ECH