Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03449 ATGGCATTCTCTAATGCTTTGGTTTTATGCTTCTTTTTAGCAATCATCAACATGCCACTTCCATCCCTTGCAACTGTCTACACTGTTGGAGATACTTCAGGTTGGACAATTGGTGGTGATTATAGCACATGGGCTAGTGACAAAACCTTTGCAGTTGGTGATAGCCTCGTGTTCAACTATGGAGCAAGTGGGCACACTGTGGATGAAGTTAAAGAAAGTGACTACAAATCATGCACATCTGGAAACTCAATTAGTACAGACAGTAGTGGTGCCACAACCATTCCTCTTAAGAAAGCAGGCAAACATTACTTTATATGTGGTGTTCCCGGACATTGTACCGGTGGCATGAAACTTTCTATTAAGGTTAAGGCCTCTTCTGGTTCTTCTGCTGCTCCTTCTGCAACACCATCAGCAAAAGGTTCACCTTCTTCTGATGACACCCCCGCCGCAACTACCACCACACCCTCCACCACTACTACTCCTACTAAGCAAAATGAATCTTCAGCTACAAGTCTCTCACCGATTGTTGCTTTGTTTTTTACTGTCTCATGGATCTTTAGTTATGTTTTGGTATGA 576 0.4306 MAFSNALVLCFFLAIINMPLPSLATVYTVGDTSGWTIGGDYSTWASDKTFAVGDSLVFNYGASGHTVDEVKESDYKSCTSGNSISTDSSGATTIPLKKAGKHYFICGVPGHCTGGMKLSIKVKASSGSSAAPSATPSAKGSPSSDDTPAATTTTPSTTTTPTKQNESSATSLSPIVALFFTVSWIFSYVLV 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03449 191 FunFam Blue copper 23 128 - -
Vifa2g03449 191 MobiDBLite consensus disorder prediction 129 167 - -
Vifa2g03449 191 Gene3D - 23 129 IPR008972 -
Vifa2g03449 191 PANTHER BLUE COPPER PROTEIN 24 137 IPR039391 GO:0009055
Vifa2g03449 191 CDD Phytocyanin 25 122 - -
Vifa2g03449 191 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Vifa2g03449 191 Pfam Plastocyanin-like domain 35 116 IPR003245 GO:0009055
Vifa2g03449 191 SUPERFAMILY Cupredoxins 24 122 IPR008972 -
Vifa2g03449 191 ProSiteProfiles Phytocyanin domain profile. 25 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03449 Vifa-Chr2 997183348 997184214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03449 32 131 Miscellaneous Gene Families AT1G22480 60.000 2.75e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03449 - - gmx:100306522 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03449 2 997183348 997184214 Vifa2g03449 2 997183348 997184214 ECH