Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03436 ATGAGAAGGCCATTGAAACAACTACACAAGAATGAAGAAAACCTCTTCGAAGAATTACCAGATGATGTTGTCGTCTTCATCCTCACGAAGCTCAGTTCATCCGCCTCTTCATCTTCCCATTTTCTCAACATTCTCTCAACATGCAAGAGATTCAAACAGTTAGGTCTTCATCCTTTGGTTTTATCGAAAACCGGGTCTAAAGTTCTTTTCGTTCACCCCAAAAAATGGTGTGATAGCTCTCACCGTTTTCTTAAACGCTGTGTTGACGCCGGTAGCGTGGAGGCCTTTTATACTCTTGGAATGATCCGATTTTATTGTCTTCAAAATCGGAAGAGTGGGCTATCCCTAATTGCGAAGGCGGCAATGATGATGCACGCGCCGGCGCTTTACTCACTCGCTGTGATTCAGTTCAACGGAAGCGGTGGCTCAAAGCACGACAAAGATCTACGCGCAGGAGCGGCACTTTCTGCACGCGCGTCGTCACTCGGTCACATCGACGCGCTTCGTGAGTTTGGCCATTGTCTTCAAGACGGTTACGGAGTTAAACAGAACGTTACTGAAGGACGACGGTTGTTGGTGCAGGCTAACATCAGAGAACTGTTGCTTGTCTTACGCGCTGTGGTGGCGGAGTCGCCTTCACGCGCTGGTTTCTGTCAGGAAGCGTTGCGGAGTTTGAAAAACCTGGCTGTGCCGTTGATAAATACTAGTAATAACGATGAAAACGGTTACAACGTGACGGTGCCGGAGGTGCATCCGGTGAACTGGTTTTTGAGGCAGTGGTTTGAGTCTGGGAGAGGGACTTTGGAGGAAGGGTTGAGACTGTGTTCGCATATGGGATGTGGTCGTGTGGAGATGCGGCCGCATGAGTTTCGGCGATGTTCAGTTTGTGGTACGGTGAATTACTGCTCACGTGGTTGTCAGTCACTCGACTGGAAACTGCGGCATAAAATGGAGTGTTCGCCATTGGAAGGGTGGTTGGAAGAGAATAACGGCGGCGGCGATGATGGTCCTTTAGTCGGTGGCGGCGGCGGAAACGATAACAATGGGAATGACGTGGCGGTCTAG 1065 0.4977 MRRPLKQLHKNEENLFEELPDDVVVFILTKLSSSASSSSHFLNILSTCKRFKQLGLHPLVLSKTGSKVLFVHPKKWCDSSHRFLKRCVDAGSVEAFYTLGMIRFYCLQNRKSGLSLIAKAAMMMHAPALYSLAVIQFNGSGGSKHDKDLRAGAALSARASSLGHIDALREFGHCLQDGYGVKQNVTEGRRLLVQANIRELLLVLRAVVAESPSRAGFCQEALRSLKNLAVPLINTSNNDENGYNVTVPEVHPVNWFLRQWFESGRGTLEEGLRLCSHMGCGRVEMRPHEFRRCSVCGTVNYCSRGCQSLDWKLRHKMECSPLEGWLEENNGGGDDGPLVGGGGGNDNNGNDVAV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03436 354 SUPERFAMILY HCP-like 77 195 - -
Vifa2g03436 354 ProSiteProfiles Zinc finger MYND-type profile. 277 319 IPR002893 -
Vifa2g03436 354 Pfam MYND finger 280 319 IPR002893 -
Vifa2g03436 354 SUPERFAMILY HIT/MYND zinc finger-like 273 324 - -
Vifa2g03436 354 FunFam Predicted protein 267 324 - -
Vifa2g03436 354 PANTHER MYND DOMAIN-CONTAINING 7 332 IPR044508 -
Vifa2g03436 354 MobiDBLite consensus disorder prediction 328 354 - -
Vifa2g03436 354 Gene3D Tetratricopeptide repeat domain 73 205 IPR011990 GO:0005515
Vifa2g03436 354 Gene3D - 266 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03436 Vifa-Chr2 991364173 991365418 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03436 - - cam:101501389 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03436 2 991364173 991365418 Vifa2g03436 2 991364173 991365418 ECH