Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03428 ATGGCAGTTATGAAACTCAGATCCTTCATTCTCTTGCTCCTTCTTACTCTATCAACTCTCTTCCTTCACCCAACAACCTCTGCACTAAACCCAAACCAACCCATCAAAACCATTGTAGTTCTAGTCATGGAAAATCGTTCCTTTGATCACATTGATGATGCAGAGTTTGTGGATCCGGATCCAGGCCATTCTTTTGAGGATGTTTTGAAACAGGTATTTGGTAATGGTAATGTTTCAAATTCAATTCCTTCAATGAATGGTTTTGTGGAACAAGCATTGTCTGTTTCTCAGAATCTTTCTGAGACTGTCATGAAAGGGTTTAAACCGAAATCTGTTCCCGTTTATGCTGCTTTGGTTAAGGAATTTGCTGTTTTTGATAGGTGGTTTAGTTCGATTCCCGGTCCGACACAACCCAATAGGCTTTTTGTCTATTCTGCAACTTCTCATGGTTCAACTAGTCATGTTAAGAGACAGTTAGCAATAGGAAATCTAAGGAAGTTGAAGTATATATCCAAGTTTCATCGGTATGAGTCTAGTTTTAAGAAAAATGCTGGAAATGGGAAGCTTCCGGCCTTGACGGTGATTGAGCCGAGGTATTTTGACTTGACGGGCTCGTCTGCGAATGATGATCATCCTTCTCATGATGTTGCAAATGGACAAATGTTGGTGAAGGAGGTTTATGAGACTCTGAGAGCTAGTCCACAGTGGAATGAAACTCTTTTGGTTATTACATATGATGAGCATGGTGGATTTTTTGATCATGTCAAGACTCCTTTTGTTAACATTCCTAACCCAGACGGGAACACAGGACCTGCTCCTTATTTCTTTAAGTTTGATAGGTTAGGGGTTCGCGTGCCGACTATTATGGTCTCTCCTTGGATCAAGAAAGGAATTGTGGTAAGAAGTCCCAAAGGACCAGCTGCGAACTCCGAGTTTGAGCACTCGTCAATTCCCGCGACCATAAAGAAGTTGTTCAACCTTTCCTCTAACTTTTTGACTCACAGAGATGCATGGGCTGGGACATTTGAGGATGTTGTTGGCGAGTTAACTTCGCCCAGAACAGACTGTCCAGTGACTTTGCCGGACGTGATGCCTTTAAGGAGCACTGAAGCGAAAGAAAATGGCAGCCTTTCTGAGTTTCAGAGTGAGGTGGTTCAGTTGGCAGCTGTTCTAAATGGAGACCACTTCTTGAGCAGTTTCCCGAATGAAATGAGTAAGAAGATGAATGTGAAGGAAGCTCATGATTATGTGACAGGAGCTGTTTCGAGATTCATAAGAGCTAGCAAAGAGGCTGTCAAGTTGGGGGCTGATGAGTCTGCTATTGTAGATATGAGATCCTCTCTCACTACTAGATCTTCTACTCATAATTAA 1371 0.423 MAVMKLRSFILLLLLTLSTLFLHPTTSALNPNQPIKTIVVLVMENRSFDHIDDAEFVDPDPGHSFEDVLKQVFGNGNVSNSIPSMNGFVEQALSVSQNLSETVMKGFKPKSVPVYAALVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLAIGNLRKLKYISKFHRYESSFKKNAGNGKLPALTVIEPRYFDLTGSSANDDHPSHDVANGQMLVKEVYETLRASPQWNETLLVITYDEHGGFFDHVKTPFVNIPNPDGNTGPAPYFFKFDRLGVRVPTIMVSPWIKKGIVVRSPKGPAANSEFEHSSIPATIKKLFNLSSNFLTHRDAWAGTFEDVVGELTSPRTDCPVTLPDVMPLRSTEAKENGSLSEFQSEVVQLAAVLNGDHFLSSFPNEMSKKMNVKEAHDYVTGAVSRFIRASKEAVKLGADESAIVDMRSSLTTRSSTHN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03428 456 Gene3D Alkaline Phosphatase, subunit A 25 161 IPR017850 -
Vifa2g03428 456 Gene3D Alkaline Phosphatase, subunit A 199 374 IPR017850 -
Vifa2g03428 456 FunFam Non-specific phospholipase C1 188 375 - -
Vifa2g03428 456 Pfam Phosphoesterase family 167 327 IPR007312 GO:0016788
Vifa2g03428 456 Pfam Phosphoesterase family 53 155 IPR007312 GO:0016788
Vifa2g03428 456 SUPERFAMILY Alkaline phosphatase-like 222 328 IPR017850 -
Vifa2g03428 456 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 163 427 IPR007312 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03428 Vifa-Chr2 990335461 990337420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03428 9 451 Acyl Lipid Metabolism Gene Families AT3G48610 68.047 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03428 K01114 - gmx:100816313 728.783