Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03419 ATGGCTACCGAAACCCTAATCGATAACCAACCATCTCTTCACGACAAACTTCCACCCAATCGAAACAATCCTGCTGATGAAGAAGATGCTTTGACTGAAGTTGACGAATCGAAAGAGAAGAAAGAGATCCACGAAACGGACGAGGGTACTAATGGGGATGACGAGGAGGAAGAGGCTAAGGGGAGTCAGTTGATGAAAGAGACGACATCTGAGAAGAAGAGTCCGGTTACGCCGACCAGTGATAGACCGACAAGGGAACGGAAGTTGGTGGAGCGATACTCTGAACCGTCGGCAGGCAAGTTGGGAAAGTCTGCGTCTAGTAAAGTTATTGTAATTGAGAAGGGACGTGGTACTCAGCTTAAGGATATTCCAAACGTGGCTTTCAAGTTGTCAAAGAGAAAGCCTGATGACACCCTGAATATGCTTCACAATCTACTGTTTGGGAAGAAATCAAAGGCACAAACTATGAAGAAGAATATAGGGCAGTTTTCTGGTTATGTATGGGCTGAAAATGAGGAAAAACAGAGGATAAAGATAAAGGATAGGATTGATAAATTTGTGAAAGAAAAGTTGGCAGACTTCTGTGATGTGCTTAATATCCCAATTAGCAAGACCGGTTCAAGGAAGGAGGAACTGTCTGTAAAGCTGTTGGAATTTCTTGAGGCCCCACATGCTACTACTGATGTTCTGCTTGCTGAAAAAAAACTGAAAGGTAAGAAGAAGCAAACTAGAAAAGCAACCACTGGCAAATCTCCCAGGGAAGCATCCACGGAAACACCAGCAAAGAAGAAAAAGCAAATTCCACAATCTGGGAAAAAAAGAAAACCATTGTCCGATGTTGAAGATGATGATAAAGCTGAACTTTCAGATGCAAAAGATGAGTCACAAGATGAAGATGTTGTAGTGGCAAATAATGGAACTGAGGATGAGGTGGGTAAATCAGAGGAAGAGGAAGAGGAAGATATATCAAAGGCTCACAAGACTAAGTCCAAACAGTCTGAGAATGAAGGTTCAGTTGCTAAAGCTGAAGCTAAAATACCATCTGTTAAGAAAACCTCTGCAAAAGCAAGCCAAAGCAGTGAAAAATCCCCCAAAAAATCAAAATCTAAGAAATCCATTACTGATCATGATTCTGCCTCTCTTCCAAAGTCAAACCAACCTGACACCAAGAAACTGAAAACTGGAAAGGAGAAACAGGATACTAAGGAGAAGGATGCAATCAAAACCTCAAAGGCGGGTAAAGAACAAGCAAAAGGTAGAAGTAGCAAGAAGAACAAGGTAAAAGAACCTAGCAGGGAGGACATGCACTCAGTTGTTGCTAATATTCTGAAGGAAGTAGATTTCAACACTGCAACTTTGTCAGATATCCTCCGCCAACTTGGTACACATTTTGGCCTTGATTTAATGCATAGAAAAGCAGAGGTGAAAAATATCATCACTGATGTAATTAATAGCATGTCTGACGAGGAAGGTGATGACGAGGAAGCTGAAAATGATGAAGATGGAGATGGAGGTGTTGATGAGGGTGGTGATGCCAGTGATGAAGATGATAATGAATGA 1560 0.4167 MATETLIDNQPSLHDKLPPNRNNPADEEDALTEVDESKEKKEIHETDEGTNGDDEEEEAKGSQLMKETTSEKKSPVTPTSDRPTRERKLVERYSEPSAGKLGKSASSKVIVIEKGRGTQLKDIPNVAFKLSKRKPDDTLNMLHNLLFGKKSKAQTMKKNIGQFSGYVWAENEEKQRIKIKDRIDKFVKEKLADFCDVLNIPISKTGSRKEELSVKLLEFLEAPHATTDVLLAEKKLKGKKKQTRKATTGKSPREASTETPAKKKKQIPQSGKKRKPLSDVEDDDKAELSDAKDESQDEDVVVANNGTEDEVGKSEEEEEEDISKAHKTKSKQSENEGSVAKAEAKIPSVKKTSAKASQSSEKSPKKSKSKKSITDHDSASLPKSNQPDTKKLKTGKEKQDTKEKDAIKTSKAGKEQAKGRSSKKNKVKEPSREDMHSVVANILKEVDFNTATLSDILRQLGTHFGLDLMHRKAEVKNIITDVINSMSDEEGDDEEAENDEDGDGGVDEGGDASDEDDNE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03419 519 MobiDBLite consensus disorder prediction 20 48 - -
Vifa2g03419 519 MobiDBLite consensus disorder prediction 1 101 - -
Vifa2g03419 519 Gene3D - 421 485 - -
Vifa2g03419 519 MobiDBLite consensus disorder prediction 78 94 - -
Vifa2g03419 519 MobiDBLite consensus disorder prediction 486 519 - -
Vifa2g03419 519 MobiDBLite consensus disorder prediction 318 338 - -
Vifa2g03419 519 MobiDBLite consensus disorder prediction 483 519 - -
Vifa2g03419 519 MobiDBLite consensus disorder prediction 236 434 - -
Vifa2g03419 519 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 429 484 IPR014876 -
Vifa2g03419 519 FunFam DEK domain-containing chromatin associated protein 421 485 - -
Vifa2g03419 519 Pfam DEK C terminal domain 430 482 IPR014876 -
Vifa2g03419 519 PANTHER DEK PROTEIN 27 499 IPR044198 GO:0003677|GO:0006325
Vifa2g03419 519 MobiDBLite consensus disorder prediction 361 377 - -
Vifa2g03419 519 MobiDBLite consensus disorder prediction 389 434 - -
Vifa2g03419 519 SUPERFAMILY DEK C-terminal domain 428 484 - -
Vifa2g03419 519 Coils Coil 169 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03419 Vifa-Chr2 986378153 986382637 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03419 K17046 - gmx:100788998 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03419 2 986378153 986382637 Vifa2g03419 2 986378153 986382637 ECH