Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03355 ATGGCCTTGCAAGTGCAGGCCACACTTCACACTACAAGATCCACACGAGCTTCGTTATTATCTCCAACACTCTCCAAATCCAGTTCTTCTTTGAAATCATCTTTCTTCTCTCGTTCCCTTAACCTCGTACTTCATCCTAATCAACAACATAGTTTTCTTTATGGACCTCCTAGGTTTACCATGCGTCTAGCTTCCAAACAAGCTTATATCTGTCGTGACTGCGGGTATATTTACAATGAGAAGAGCCCCTTTGAGAAATTGCCTGATAAATACTTCTGCCCCGTTTGTGGTGCTCCAAAACGAAGGTTTAAGCCCTATGCTCCACCTGTCAACAAAAGTGCAAATGAAAAAGATGTTAGAAAGGCACGAAAAGCTGAACTCCAAAGAGATGAAGCAATTGGGAAAGCACTTCCTATTGCAGTTGCCGTAGGAGTTGTAGCTCTTGTGGGATTATACTTCTATCTCAACAGCACATTTTAG 480 0.4229 MALQVQATLHTTRSTRASLLSPTLSKSSSSLKSSFFSRSLNLVLHPNQQHSFLYGPPRFTMRLASKQAYICRDCGYIYNEKSPFEKLPDKYFCPVCGAPKRRFKPYAPPVNKSANEKDVRKARKAELQRDEAIGKALPIAVAVGVVALVGLYFYLNSTF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03355 159 CDD rubredoxin 69 106 IPR024935 GO:0005506
Vifa2g03355 159 ProSiteProfiles Rubredoxin-like domain profile. 66 106 IPR024934 GO:0005506
Vifa2g03355 159 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 1 159 - -
Vifa2g03355 159 Gene3D - 66 106 - -
Vifa2g03355 159 Pfam Rubredoxin 69 103 IPR024935 GO:0005506
Vifa2g03355 159 SUPERFAMILY Rubredoxin-like 66 109 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03355 - - gmx:100306219 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03355 2 963689915 963690724 Vifa2g03355 2 963689915 963690724 ECH
Vifa6g03272 6 1077479877 1077480290 Vifa2g03355 2 963689915 963690724 PCT
Vifa2g03355 2 963689915 963690724 Vifa2g03355 2 963689915 963690724 PCT