Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03354 ATGGGTACGGATTCTAACGGATGGAACCGTGCTCGAGGGTTAGCAGTCAAAGCTCTCCTTTTCATCGGCGGTGCTCTTCTCGTTAAACGTCTCCGTAAGTCCACCACCCGTTGGGACCATGCTCGTCTAGTCGCTCAGTCACTCACCGGCGAAAAGTATTCGAAAGACCAAGCTTCTAGAGACCCTGATAACTATTTCAATATTAGAATGCTTACATGTCCAGCAGCAGAGTTAGTAGATGGTTCAAAAGTTTTATATTTTGAGCAGGCTTTTTGGAGGAGTCCGCAAAAACCCTTTCGTCAGAGGTTGTTAATGGCGAAACCTTGTCCAAAAGAGTTGAAATGTGATGTTGAGTTAAGTACATATGCCATTAGAGACATGGAGGAATACAAAAATTTCTGTGATCGGCCAAAGGATCAGCGTCCGCAACCAGAAGAAGTCATTGGGGATATTGGAGAACATTTGACAACAATACATCTTAAGCGTTGTTCACGTGGAAAACGTTGCTTATATGAAGGTTCATCCCCACCTGGTGGATTTCCTAATTCATGGAATGGAGCAACCTACTGTACTTCAGAACTTGCAGTTATGAAAAACAGCGAGATACACACCTGGGATCGGGGTTATGATGACGATGGAAATCAAGTTTGGGGACAAAAAGAAGGCCCTTACGAGTTCAAGCCTGCACCAACCTCCTGTTTCAGTGATATGCTTTCCCCCTTGAGTTTACCACCTCTACCACCCATGGATAGAAGAATAGAGGGTTCATTTATTTTGCAAGAATGA 786 0.4415 MGTDSNGWNRARGLAVKALLFIGGALLVKRLRKSTTRWDHARLVAQSLTGEKYSKDQASRDPDNYFNIRMLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRLLMAKPCPKELKCDVELSTYAIRDMEEYKNFCDRPKDQRPQPEEVIGDIGEHLTTIHLKRCSRGKRCLYEGSSPPGGFPNSWNGATYCTSELAVMKNSEIHTWDRGYDDDGNQVWGQKEGPYEFKPAPTSCFSDMLSPLSLPPLPPMDRRIEGSFILQE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03354 261 Gene3D CpcT/CpeT domain 38 237 IPR038672 -
Vifa2g03354 261 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 3 261 IPR010404 GO:0016829|GO:0017009
Vifa2g03354 261 Pfam CpeT/CpcT family (DUF1001) 44 227 IPR010404 GO:0016829|GO:0017009
Vifa2g03354 261 CDD CpcT 42 229 IPR010404 GO:0016829|GO:0017009
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03354 Vifa-Chr2 963683720 963689124 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03354 - - gmx:100800615 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03354 2 963683720 963689124 Vifa2g03354 2 963683720 963689124 ECH