Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03353 ATGGCCTCTGCAATAAAACACTTATACACTGCATTACTCTCCATCCTTCTCTTCTCCGCTTCAACTTCCACGGCGGAGCTGCTCCCACCTATTTGGCCGGAGCAGTTCCATTCCGTGCTGTTCATGAACCAGAGCGGAACCCTCCAGAAAATAGACTTATGGTACGACTGGTCTAACGGCCGAAACTTCAACATCATCCAGGGTCAACTCAAAGAAGTCGCCGTCTACGATCTCGAATGGACCAACGGTACCTCTTTTGTCTACACTCTCCACCCCTCCGACCGCCACTGCAAGATCCTCTACCCTGGCGTCGGTATTCTCCGCCGTAATTGGCTTGACGGTGCTACATATTTAGGTCAAGAACAAATTGATAATTTCCTGTGTAATGTTTGGGAGAAAGCTGATTTCATTGTGTATTATGAAGATGCTGGAACTCGAAGACCTGTTAAGTGGGTCTTCTCCTCAGGATATACGGCTCATGTGATGACATTTGAGGTTGGAGCAGTACTTGAGGATTCTAGTTGGCAGGCTCCTGTATACTGTTTCAATAAGACTGAGAACATGTTAGAGTCTGCTGCTGTTCGTGGCGATACTTTTGGGAGTTTGATGAGAGGCAAATTCAACCATGTTCGTGATATTTGA 642 0.4673 MASAIKHLYTALLSILLFSASTSTAELLPPIWPEQFHSVLFMNQSGTLQKIDLWYDWSNGRNFNIIQGQLKEVAVYDLEWTNGTSFVYTLHPSDRHCKILYPGVGILRRNWLDGATYLGQEQIDNFLCNVWEKADFIVYYEDAGTRRPVKWVFSSGYTAHVMTFEVGAVLEDSSWQAPVYCFNKTENMLESAAVRGDTFGSLMRGKFNHVRDI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03353 213 PANTHER EXPRESSED PROTEIN 16 190 IPR038941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03353 Vifa-Chr2 963675667 963677246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03353 26 200 Glycosyltransferase AT4G14100 61.143 6.14e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03353 - - gmx:100306330 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03353 2 963675667 963677246 Vifa2g03353 2 963675667 963677246 ECH