Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03342 ATGAGAGCTGACGAAGTTGAAGGAGTTTCCGCAGATAACCACAATCCTAACTCAGATATAGAACTCATTGGTGTTCATACTGAAAGATTACCTCACAATGTTTCACTCAACAAAAGAAGAGCTACCAAATTGAAAGTTTCAAATTCAACCTCTGCTATAGATCTTAACCATGGCAAATCACAACAAGTACAAGATGAAGAAAAAGAACAAGAAGAAGATTACGTTGAAGTCACTATGGATATTCAAGGCGAATCCATTGCTTTACACAGTGTTAAAACGGTTACAGGAAGTGGAATTAATGATGATGGTGAAGATGAGAAACGCGTATTGCTTGGGAAAGGAATGGAGAAGAAGAGGTCGTTTGGTGCTTCGTTTGTGCGAACTGCTTCGATTCGAATAAAGCATGTTTCTCAGGAATTGAAGAGACTGACTTCTTTTTCGAATTCGAATTCGAAACAAGTTGGACCTGAGAAGGTTTATGATAGGACTAAGTCTGCGGCTTCTCATGCTCTTATTGGACTTAAGTTTATTAATAAGAAGACTGATGGTGATGATGGTGTTGGATGGTTTGAGGTTGAGAAACAGTTTGAGATTCTCACGAATTCGAGGGAGGATGGTTTGCTTCATCGTTCTCTCTTTGCGAAATGCATAGGGATGAACAAAGAATCTGAGGCTTTTGCTGGTGAGCTATTTGATGCTATGTCTAGGAGGAGAAATATTCATGGAGATTCAATTAATAAGGCACAGTTGAAGGATTTTTGGGACCAGATTTCTGACCAGAGTTTTGATTCTAGGCTTAGAACATTCTTTGACATGGTTGATAAAGACGCTGACGGAAGAATCACTGAAGAAGAAATTAAACAGATTATTTGCCTTAGTGCCACTACAAACAAACTCTCAAACATACAGAAGCAGGCAGAAGAATATGCTGCTTTGATCATGGAAGAACTAGACCCTGATGGCACAGGATTTATCATGGTAAATGACCTAGAGATACTCTTGTTGCATGGACCAACTCATTCTACAAGAGGAGATAGTAAATACCTGAGCCAAATGCTAAGCATAAAGCTTAAGGCTACATATGAATACAATCCTGTTAGGAAGAGGTATAGAGATGCCATTTACTTTCTGCAGGACAATTGGCAAAGAACTTGGATACTGGTACTATGGATTGGTGTTATGTGTGGTCTATTTGCCTACAAATTCATGCAATACAGAAGGAAAGCTGCCTATGAGGTTATGGGTCATTGTGTGTGCATGGCTAAAGGTGCAGCTGAGACACTCAAATTGAACATGGCAATTATCTTGTTACCTGTTTGCCGTAACACTATCACATGGCTTAGGAACAAGACCAAACTCGGCATTGCTGTTCCTTTTGATGACAACCTCAACTTCCACAAGGTGATAGCTGTGGCTATAGCAATTGGAGTTGGTGTACATGCTGTTTATCATCTTACTTGTGATTTTCCTCGCCTTCTTCATGCAAATAGTGAAAAGTACAAGCAGATGGAACCATTTTTCGGAAACCAACCATCAAATTATTGGCATTTTGTGAAATCATGGGAAGGGGTCACAGGGATTTCAATGGTTGTTTTAATGACAATAGCCTTCACACTGGCTAGTCCTTGGTTAAGGAGAGGAAGGGTTAAGCTACCAAAACCCCTCAATAGTCTAACTGGTTTCAATGCTTTTTGGTATTCTCATCATCTCTTTGTATTTGTCTATGTCCTTTTGGTTGTGCATGGAATCAAACTTTACTTGACTAAGGAATGGTACAAGAAAACGACATGGATGTATTTGGCTATTCCCATCATCATTTATGCATTGGAAAGACTGACTCGAGCACTCAGATCAAGCATCAAGCCTGTGAGAATATTGAAGGTGGCTGTTTATCCTGGAAATGTGTTGGCTCTTCATATGTCAAAGCCTCAGGGGTTTAGATACAAGAGTGGACAATACATGTTTATAAACTGTGCTGCTGTCTCTCCATTTGAATGGCATCCATTTTCCATAACCTCTGCCCCAGGAGATGATTACCTTAGTGTTCACATCAGAACATTAGGTGACTGGACCAGGAGTCTCAGAGTCAAATTCTCAGAGAGTTGCCTTCCACCGACCCATGGGAAGAGTGGACTTCTAAGAGCTGAATGCATGCAAGGAGGGGATGCCAGTCCAAGTACTCTCCCTAAAGTATTGATCGATGGTCCTTATGGAGCGCCTGCACAAGACTACAAACAATATGAAGTGGTTTTACTTGTAGGCCTAGGAATTGGGGCTACCCCAATGATAAGTATATTGAAGGACATAGTGAATAATTTTAAGGCCATGGAAGAGGATGAAGGAAACACTATAGAAGAGGGAACAAGTGAGAACAGGGTTCATTTGATTGGTTTAAAGGGTGTCTATGAAGAAGGTGATGCTCGCTCTGCTCTTATTGCTATGCTTCAATCACTTAACCATGCTAAAAATGGCGTGGATATCGTCTCTGGAACACGCGTCAAGTCTCACTTTGCTAAACCTAATTGGCGCAGCGTCTACAAACGCATTGCGCTTAATCATCCACAAACGCGAGTCGGGGTGTTTTACTGTGGGCCACCGGCAATTACTAAAGAGCTTAGTCAATTAGCTTCAGATTTTTCTCACAACACAACAACCAAATATGATTTCCACAAGGAAAATTTTTAG 2685 0.4071 MRADEVEGVSADNHNPNSDIELIGVHTERLPHNVSLNKRRATKLKVSNSTSAIDLNHGKSQQVQDEEKEQEEDYVEVTMDIQGESIALHSVKTVTGSGINDDGEDEKRVLLGKGMEKKRSFGASFVRTASIRIKHVSQELKRLTSFSNSNSKQVGPEKVYDRTKSAASHALIGLKFINKKTDGDDGVGWFEVEKQFEILTNSREDGLLHRSLFAKCIGMNKESEAFAGELFDAMSRRRNIHGDSINKAQLKDFWDQISDQSFDSRLRTFFDMVDKDADGRITEEEIKQIICLSATTNKLSNIQKQAEEYAALIMEELDPDGTGFIMVNDLEILLLHGPTHSTRGDSKYLSQMLSIKLKATYEYNPVRKRYRDAIYFLQDNWQRTWILVLWIGVMCGLFAYKFMQYRRKAAYEVMGHCVCMAKGAAETLKLNMAIILLPVCRNTITWLRNKTKLGIAVPFDDNLNFHKVIAVAIAIGVGVHAVYHLTCDFPRLLHANSEKYKQMEPFFGNQPSNYWHFVKSWEGVTGISMVVLMTIAFTLASPWLRRGRVKLPKPLNSLTGFNAFWYSHHLFVFVYVLLVVHGIKLYLTKEWYKKTTWMYLAIPIIIYALERLTRALRSSIKPVRILKVAVYPGNVLALHMSKPQGFRYKSGQYMFINCAAVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTRSLRVKFSESCLPPTHGKSGLLRAECMQGGDASPSTLPKVLIDGPYGAPAQDYKQYEVVLLVGLGIGATPMISILKDIVNNFKAMEEDEGNTIEEGTSENRVHLIGLKGVYEEGDARSALIAMLQSLNHAKNGVDIVSGTRVKSHFAKPNWRSVYKRIALNHPQTRVGVFYCGPPAITKELSQLASDFSHNTTTKYDFHKENF 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03342 894 MobiDBLite consensus disorder prediction 1 20 - -
Vifa2g03342 894 CDD EFh 224 290 IPR002048 GO:0005509
Vifa2g03342 894 Pfam Ferric reductase NAD binding domain 747 778 IPR013121 GO:0016491
Vifa2g03342 894 Pfam FAD-binding domain 622 740 IPR013112 GO:0016491
Vifa2g03342 894 SUPERFAMILY EF-hand 190 339 IPR011992 -
Vifa2g03342 894 Pfam Ferric reductase like transmembrane component 423 579 IPR013130 -
Vifa2g03342 894 SUPERFAMILY Riboflavin synthase domain-like 622 739 IPR017938 -
Vifa2g03342 894 ProSiteProfiles EF-hand calcium-binding domain profile. 305 340 IPR002048 GO:0005509
Vifa2g03342 894 CDD EFh 265 325 IPR002048 GO:0005509
Vifa2g03342 894 SFLD NADPH oxidase subgroup (NOX) 73 779 - -
Vifa2g03342 894 PANTHER NADPH OXIDASE 225 894 - -
Vifa2g03342 894 Pfam Ferric reductase NAD binding domain 800 876 IPR013121 GO:0016491
Vifa2g03342 894 Gene3D Translation factors 608 699 - -
Vifa2g03342 894 PRINTS Cytochrome B-245 heavy chain signature 729 742 IPR000778 GO:0016020|GO:0016491
Vifa2g03342 894 PRINTS Cytochrome B-245 heavy chain signature 561 581 IPR000778 GO:0016020|GO:0016491
Vifa2g03342 894 PRINTS Cytochrome B-245 heavy chain signature 752 769 IPR000778 GO:0016020|GO:0016491
Vifa2g03342 894 PRINTS Cytochrome B-245 heavy chain signature 469 487 IPR000778 GO:0016020|GO:0016491
Vifa2g03342 894 ProSiteProfiles EF-hand calcium-binding domain profile. 261 296 IPR002048 GO:0005509
Vifa2g03342 894 Gene3D - 778 894 IPR039261 -
Vifa2g03342 894 FunFam Respiratory burst oxidase homolog A 160 282 - -
Vifa2g03342 894 FunFam Respiratory burst oxidase homolog A 609 701 - -
Vifa2g03342 894 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 730 879 IPR039261 -
Vifa2g03342 894 Gene3D - 160 282 - -
Vifa2g03342 894 MobiDBLite consensus disorder prediction 47 70 - -
Vifa2g03342 894 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 618 743 IPR017927 GO:0016491
Vifa2g03342 894 Pfam Respiratory burst NADPH oxidase 161 264 IPR013623 GO:0004601|GO:0050664
Vifa2g03342 894 CDD NOX_Duox_like_FAD_NADP 625 894 - -
Vifa2g03342 894 ProSitePatterns EF-hand calcium-binding domain. 274 286 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03342 Vifa-Chr2 959725415 959730866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03342 13 894 Miscellaneous Gene Families AT5G47910 59.740 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03342 K13447 - gmx:100800248 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03342 2 959725415 959730866 Vifa2g03342 2 959725415 959730866 ECH