Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03306 ATGAACTTTCCAAATCCAACCCATGCCACGTCATCACCTTCTACTTCTTCCTCATATACACTCACCCATGCTTCTCCTAATTTCAAGCGTCCTATGTTATTGCCACAGGCAATCTGTACCTCACAAAAAAAGTCATTATGCTCTGGAGCCTTCGTGGAGCCTTATGTTAACTCCAATCATGTGAAAAGTTACATAACTTCCGGTTTTTCTCCCCAGCGATCTGAAGCACAATCCTTGGTTTCCAACCAATCACTCAACAAACACGCGTTCTCGGTGGAAGCTTTAGTAACTCGAACAGCTCAAGATGTTTCTGAAACAACTCTTAATGGTGATGACAAGATTGGAGTGTTGTTGCTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAACCTTTTTTATTTAACCTTTTTGCTGACCCGGATATTATACGATTGCCAAGAATATTTAGTTTTCTTCAAAAGCCACTGGCCCAGTTTGTATCTGTTCTAAGGGCTCCAAAGAGCAGAGAAGGCTATGCTTCAATTGGCGGCGGTTCTCCACTTCGACGCATAACTGATGCACAGGCTGAAGATTTGAAGAAATCTCTTTTTGCAAAGAATGTCCCTGCCGAAGTGTATGTTGGTATGCGTTACTGGCATCCATTCACTGAGGAAGCTATTGAACAGATTAAAAAAGATGGAATTACAAAGCTGGTCGTTCTCCCACTTTATCCACAATTTTCAATATCAACCAGTGGCTCGAGCTTACGTCTACTGGAAAGCATATTCCGAGAGGATGAGTATCTAGTCAACATGGAGCACACGGTATTACCTTCATGGTATCAACGTGAAGGATACATAAAGGCCATGTCAAGTTTAATCGAAAAAGAGCTGAAGAGTTTTGACTCCCCTAAGGAGGTCATGATATTCTTTAGTGCGCACGGGGTGCCTCTTGCTTATGTGGAAGAGGCCGGTGATCCATACAAAGCAGAGATGGAGGAATGTGTGGATTTGATCATGGAAGAGCTTGAGACAAGAAAGATAACAAATGCTTACACCCTTGCCTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCATATACAGACGTGACGATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGTTGGCTGTTCCAATTAGCTTTGTCAGTGAACATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAATTGGCTCTAGAATCTGGAATAGAAAAATGGGGCCGTGTTCCTGCTCTAGGATGCGAACCTTCCTTCATTTCTGATTTGGCAGATGCTGTGATTGAAAGTCTCCCATATGTTGGTGCCATGGCAGTTTCAAACATCAATGCTCGACAGTCTTTGGTTCCGCTTGGCAGCGTAGAGGAGTTATTGGCAACATACGACTCACAACACAGGGAGTTGCCATCGCCGGTGATAGTGTGGCAATGGGGTTTGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCCATGCTAGCTGTGCTGCTGCTTTTGTTTTTTGAAGTCACCACACCTGATAGTGTTTTTCACCAGTGGGGAATTTTAATGTCCTCTCTTAGGTGA 1584 0.4299 MNFPNPTHATSSPSTSSSYTLTHASPNFKRPMLLPQAICTSQKKSLCSGAFVEPYVNSNHVKSYITSGFSPQRSEAQSLVSNQSLNKHAFSVEALVTRTAQDVSETTLNGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVLRAPKSREGYASIGGGSPLRRITDAQAEDLKKSLFAKNVPAEVYVGMRYWHPFTEEAIEQIKKDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMEHTVLPSWYQREGYIKAMSSLIEKELKSFDSPKEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKITNAYTLAYQSRVGPVEWLKPYTDVTIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPSFISDLADAVIESLPYVGAMAVSNINARQSLVPLGSVEELLATYDSQHRELPSPVIVWQWGLTKSAETWNGRVAMLAVLLLLFFEVTTPDSVFHQWGILMSSLR 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03306 527 CDD Ferrochelatase_N 114 276 IPR033659 -
Vifa2g03306 527 Gene3D - 113 436 - -
Vifa2g03306 527 PANTHER FERROCHELATASE 109 463 IPR001015 GO:0004325|GO:0006783
Vifa2g03306 527 Hamap Coproporphyrin III ferrochelatase [cpfC]. 112 437 IPR001015 GO:0004325|GO:0006783
Vifa2g03306 527 MobiDBLite consensus disorder prediction 1 22 - -
Vifa2g03306 527 ProSitePatterns Ferrochelatase signature. 303 324 IPR019772 GO:0004325|GO:0006783
Vifa2g03306 527 Pfam Ferrochelatase 113 436 IPR001015 GO:0004325|GO:0006783
Vifa2g03306 527 Gene3D - 275 418 - -
Vifa2g03306 527 SUPERFAMILY Chlorophyll a-b binding protein 481 522 - -
Vifa2g03306 527 CDD Ferrochelatase_C 282 420 IPR033644 -
Vifa2g03306 527 SUPERFAMILY Chelatase 112 443 - -
Vifa2g03306 527 FunFam Ferrochelatase 113 291 - -
Vifa2g03306 527 NCBIfam ferrochelatase 112 437 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03306 Vifa-Chr2 949773079 949776496 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03306 K01772 - gmx:100785669 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03306 2 949773079 949776496 Vifa2g03306 2 949773079 949776496 ECH
Vifa2g03306 2 949773079 949776496 Vifa2g03306 2 949773079 949776496 PCT