Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03303 ATGCAAGAGACGCTGTTAAATGTTTCAGAGCTGCAACAGCTTCAAGACAGCAATGTAAAGAAGAATAATAAGTCAGAGGAGATGGAAGTGGTAATGGTTGCAACTTCGTGCCGTCGACCACCGCGGACACGGCGCGTGTCACCGACGACGGTGGAAAAGGAGCTTCCCAACGGTGATGTGTATAGTGGAAGCTTATCCGGGAACACGCCGCATGGGAAAGGGAAGTACGTTTGGTGTGATGGGTGTATGTATGAAGGAGAGTGGAAAAAGGGAAAAGCGTGGGGGAAAGGGAGGTTTTCGTGGCCTTCAGGAGCGACTTATGAGGGTGATTTTGTTTCTGGGAGAATGGAAGGTTCTGGAAGTTTTGTTGGTGTGGAAGGTGATACTTATAGAGGTAGTTGGATTTCTGATCGGAAGCATGGGTTTGGTGAGAAATGTTATGCTAATGGTGATGTGTATGAGGGGTGGTGGAGGTTCAATTTGCAAGATGGGGAAGGGAAGTATATTTGGAAGAACGGGAATGAGTATGTTGGAGAGTGGAAATGTGGAGCTATATCGGGGAATGGGATGTTGATGTGGAAGAATGGGAACCGTTATCAAGGTTGTTGGGATAACGGTGTGCCGAAGGGGAAAGGTGTGTTTACTTGGCGCGATGGGAGTGTTTCCGCTGGGAATTGGGGGAATGAGGAAGATAGGAATGTCAATAAGAGGGTTTCTGTTTCTGTGTCGGTTGATGGTTCTAAGAGTGTGGTTTTTCCGAGGATTTGTATTTGGGAACTTGATGGGGAAGCTGGTGATATTACTTGTGATATTCTTGATAATGTGGAGGCGTGTATGTTTTATAGAGATGGAAGTGAATCGGAGAATGGTGGTGGAGATGCAGGGTGTGGATATGGAACCTCACAGTTGATGCACAAGAGTCCTTGTTATCCGCTTAATGGGGATGTTAAGAAACCTGGTTTTACTGTTTCTAAGGGGCATAAGAGCTATGATTTGATACTTAATCTTCAACTGGGTATTAGATATTGTGTTGGGAAGCATGCTTCGGTGCCTCGAGAGCTTAGGTCGGGAGATTTTGATCCAAAGGAGAAGTTCTGGACGAGGTTCCCTCCGGAAGGCTCTAAGTTTACGCCTCCACATCAATCGGTGGACTTCAGGTGGAAAGACTACTGTCCAGTGGTGTTCAGGCATCTGAGGGAATTATTTGCTATAGATCCGGCCGATTACATGCTTGCGATTTGTGGCAATGATACACTGAGAGAAATGTCTTCACCTGGCAAAAGTGGAAGCTCCTTTTACCTTACTCAAGATGACCGTTTTATTATCAAGACCTTGAGGAAGTCTGAAGTCAAGGTGCTGATCAAGATGCTTCCCAGTTACTATCAGCATGTTTCTCAGTACAAGAACTCGTTGGTTACAAAGTTCCTAGGAGTTCATTGTGTCAAACCTATTGGAGGTCAAAAGACTCGGTTTATTGTAATGGGAAATGTGTTTTGTTCGGAGTATCGGATTCATAAGCGGTTTGACCTTAAAGGTTCTTCTCATGGCCGTACAACCGATAAACCCCGTAAGGAGATTGATGAGGCTACTACTCTTAAAGATCTTGATCTTAGTTATATCTTTCGCCTGGAGCAATCTTGGTTTCAAGAGCTTAAATGGCAACTTGATAAAGACTGTGAGTTCCTGGAAGCCGAGGGAATAATGGACTATAGTTTTCTCATTGGCCTTCATTTTCGTGATGATTACTTAACCGATGAAATGAAAAATTCACCTAATGAATTGAGTTCAGGCAAGAGAGACATACAAAATGATGACATGCAGGACATGAGGTGGATACCCATAGGCCGGGGACCTCTAATCCGGCTGGGAATAAACATGCCAGCAAGAGCTGAGAGAGTGTGTAAAGCTGGATTGGATCAGCAGCACACTGGAAGTAGCAAATTTATCTCTTCAGAGAGTAGTGGTGAGATCTCTGATGTAATCCTATATTTTGGCATCATTGACATTCTCCAAGACTATGATATTAGCAAAAAGCTAGAGCATGCATACAAGTCACTACAAGTGGACCCCGCCTCGATCTCAGCCGTTGATCCCAAGCTATATTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTTGAGGACAAATGA 2154 0.4438 MQETLLNVSELQQLQDSNVKKNNKSEEMEVVMVATSCRRPPRTRRVSPTTVEKELPNGDVYSGSLSGNTPHGKGKYVWCDGCMYEGEWKKGKAWGKGRFSWPSGATYEGDFVSGRMEGSGSFVGVEGDTYRGSWISDRKHGFGEKCYANGDVYEGWWRFNLQDGEGKYIWKNGNEYVGEWKCGAISGNGMLMWKNGNRYQGCWDNGVPKGKGVFTWRDGSVSAGNWGNEEDRNVNKRVSVSVSVDGSKSVVFPRICIWELDGEAGDITCDILDNVEACMFYRDGSESENGGGDAGCGYGTSQLMHKSPCYPLNGDVKKPGFTVSKGHKSYDLILNLQLGIRYCVGKHASVPRELRSGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFAIDPADYMLAICGNDTLREMSSPGKSGSSFYLTQDDRFIIKTLRKSEVKVLIKMLPSYYQHVSQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKPRKEIDEATTLKDLDLSYIFRLEQSWFQELKWQLDKDCEFLEAEGIMDYSFLIGLHFRDDYLTDEMKNSPNELSSGKRDIQNDDMQDMRWIPIGRGPLIRLGINMPARAERVCKAGLDQQHTGSSKFISSESSGEISDVILYFGIIDILQDYDISKKLEHAYKSLQVDPASISAVDPKLYSKRFRDFIHRIFVEDK 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03303 717 SUPERFAMILY SAICAR synthase-like 325 713 - -
Vifa2g03303 717 FunFam Phosphatidylinositol 4-phosphate 5-kinase 315 496 - -
Vifa2g03303 717 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 326 713 IPR002498 GO:0016307|GO:0046488
Vifa2g03303 717 Pfam MORN repeat 84 105 IPR003409 -
Vifa2g03303 717 Pfam MORN repeat 176 198 IPR003409 -
Vifa2g03303 717 Pfam MORN repeat 153 174 IPR003409 -
Vifa2g03303 717 Pfam MORN repeat 199 221 IPR003409 -
Vifa2g03303 717 Pfam MORN repeat 130 152 IPR003409 -
Vifa2g03303 717 Pfam MORN repeat 107 129 IPR003409 -
Vifa2g03303 717 Pfam MORN repeat 61 83 IPR003409 -
Vifa2g03303 717 CDD PIPKc_AtPIP5K_like 329 712 - -
Vifa2g03303 717 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 414 712 IPR002498 GO:0016307|GO:0046488
Vifa2g03303 717 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 315 496 IPR027484 -
Vifa2g03303 717 Gene3D - 183 247 - -
Vifa2g03303 717 Gene3D - 51 123 - -
Vifa2g03303 717 Gene3D - 132 182 - -
Vifa2g03303 717 Gene3D - 497 713 - -
Vifa2g03303 717 SMART PIPK_2 355 714 IPR002498 GO:0016307|GO:0046488
Vifa2g03303 717 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 56 173 - -
Vifa2g03303 717 SMART morn 151 172 IPR003409 -
Vifa2g03303 717 SMART morn 82 103 IPR003409 -
Vifa2g03303 717 SMART morn 59 80 IPR003409 -
Vifa2g03303 717 SMART morn 197 218 IPR003409 -
Vifa2g03303 717 SMART morn 105 126 IPR003409 -
Vifa2g03303 717 SMART morn 174 195 IPR003409 -
Vifa2g03303 717 SMART morn 128 149 IPR003409 -
Vifa2g03303 717 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 70 714 IPR023610 -
Vifa2g03303 717 MobiDBLite consensus disorder prediction 37 66 - -
Vifa2g03303 717 PIRSF PIP5K_plant 1 236 IPR017163 GO:0005524|GO:0016308
Vifa2g03303 717 PIRSF PIP5K_plant 228 717 IPR017163 GO:0005524|GO:0016308
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03303 Vifa-Chr2 949223860 949227517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03303 9 716 Acyl Lipid Metabolism Gene Families AT1G21980 63.186 0.0 940
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03303 K00889 - gmx:100808235 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03303 2 949223860 949227517 Vifa2g03303 2 949223860 949227517 ECH
Vifa2g03303 2 949223860 949227517 Vifa2g03303 2 949223860 949227517 PCT