Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03296 ATGGAAACTGATTCAAATTCCAAGATTCAATTATTGGTTTGGTTTTCTCAACTCATGGGAGGTCTTTGTTCTAGGTCCGCCGAAGTTGACCGCGTCTTTGCCAGCTCCGATGCCGATTCCGATGCCTCTCATAAACCTAATACTAACAACAACCCCGCTGATTTCACAACGCCGCCTCAAGTGCGTGAGATCATGGAGAGAAACCCTGCCGGAGCAACCGCTGATGACGTTTTCTATGACGGAATCCCACGCTACGCCGCTAAAGTCTCGGAGGTGAGTTCGCGTTTGGGAAGAGCTGGATTGGGGAAGGCGGTGGAGGTTTTGGACAATCTTGGGAGCAGCATGGCAAATTTAAATGCTGGGAGTGGGTTTGTTTCTGGAGCTGCATTAAAGGGGAGTGAAATTTCCATCTTAGCGTTTGAGGTTGCAAATACTATTGTCAAAGAGGTTGTGCATGATTTAGTGTCAAAGGATACAGATGAACTTCTTAGGATTGTTGCCGCAGATAAGAGGCAGGAATTGAAAGTTTTTTCTGACGAGGTGATTCGTTTTGGAAATCGGTCAAAGGATCCTCAGTGGCACAACTTAGACCGTTACTTTGAGAAGATTAGCAGAGAATCAAATGCTCAAAGACTCTCAAGAGACGAGGCAGAATCAATAATGAAACAATTGATGAATTCAGTTCAATTTACAGCTGAGTTGTACCACGAACTTCATGCGTTGGATAGATTTGAACAAGATATTGAACATAAGGGCGAAGAGGAAGATCAAAGAGGTGATAACCTTGCATTCTTGAGAGCAGAAATTAAAAGTCAAAAGAAGCAAATTAAACATTTAAAGAAAAAATCACTCTGGTGTAGAAGTTTGGAGGAGGTTATTGAGAAGCTTGTAGACATTGTCCATTTTTTACATTTGGAGATAAGCAATAACTTTGGGAGTGCAGATAGCCAAAAGCCAATAATAGGAAACATTGGCAATCGTCAAAGATTGGGCCCTGCAGGTCTTGCTTTGCATTATGCAAATATAGTACTTCAAATTGATACCCTTGTAGCCAGGTATATTGCTATGCCTGCAAATACAAGGGACACATTGTATCAAAACTTGCCCCCTAATATAAAATCAGCTTTGCGTTCCAAGTTATCATCCATTCATGTTGTAGAAGAGATAACTGCAGCGAATATCAAAGACGAGATGGAGAAAACATTACATTGGTTGGTCCCAATTGCCACAAACACATCTAAAGCACACCATGGTTTTGGCTGGGTGGGGGAGTGGGCTAACACAGGCTCTGAGGTGGATAAGAAAGTTTTCCAGGGTGGTGCAATGCGAATTGAAACATTCCACTATGCTGATAAAGACAAAGTAGAACATTATATTCTTGAACTTCTCATATGGCTTCACCGCCTGGCCATTAAAGTTAAGTCTGGCAGTGATGCTGGCAAAGCGAGGCCTGCCATGAAATCCTCTGTCGGGGCTACCATGGAAAAGACAAATAAGCATTCTACAAATTTAACAATGGATGAGCAAAACATGCTGCAGAATGTAAGTAAGAAATCCAAAATGAAAGGAATCAGTAAGAGCTTGGACTTTGACAGTCTGAAGCCTACATTGAGTGAGAAGTGCAGACTGACCAAAAGTAGCAGTCTTTCATCAAGTAAAAGCAAGGAATCGTCTTTTAATAGGATTTCGTCAAAGCTTCCCGTGATTGATTTTGATATTGACAAAGAGCGAGCGTTGAACGTGATCGACAGACTAGATGTGGTCAGATAA 1770 0.4198 METDSNSKIQLLVWFSQLMGGLCSRSAEVDRVFASSDADSDASHKPNTNNNPADFTTPPQVREIMERNPAGATADDVFYDGIPRYAAKVSEVSSRLGRAGLGKAVEVLDNLGSSMANLNAGSGFVSGAALKGSEISILAFEVANTIVKEVVHDLVSKDTDELLRIVAADKRQELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISRESNAQRLSRDEAESIMKQLMNSVQFTAELYHELHALDRFEQDIEHKGEEEDQRGDNLAFLRAEIKSQKKQIKHLKKKSLWCRSLEEVIEKLVDIVHFLHLEISNNFGSADSQKPIIGNIGNRQRLGPAGLALHYANIVLQIDTLVARYIAMPANTRDTLYQNLPPNIKSALRSKLSSIHVVEEITAANIKDEMEKTLHWLVPIATNTSKAHHGFGWVGEWANTGSEVDKKVFQGGAMRIETFHYADKDKVEHYILELLIWLHRLAIKVKSGSDAGKARPAMKSSVGATMEKTNKHSTNLTMDEQNMLQNVSKKSKMKGISKSLDFDSLKPTLSEKCRLTKSSSLSSSKSKESSFNRISSKLPVIDFDIDKERALNVIDRLDVVR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03296 589 Coils Coil 262 282 - -
Vifa2g03296 589 Pfam Protein of unknown function (DUF668) 329 413 IPR007700 GO:0045927
Vifa2g03296 589 PANTHER OS01G0873900 PROTEIN 56 149 IPR045021 GO:0045927
Vifa2g03296 589 MobiDBLite consensus disorder prediction 36 58 - -
Vifa2g03296 589 MobiDBLite consensus disorder prediction 40 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03296 Vifa-Chr2 947286870 947301864 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03296 - - gmx:100779607 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03296 2 947286870 947301864 Vifa2g03296 2 947286870 947301864 ECH