Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03294 ATGTACTCCAGCAATTTGATTGGGTTCATATTGGCCGTTGTTTCCGGAGCTTTCATCGGCTCCAGTTTCATTATCAAGAAAAAAGGTCTCCAACGTGCCGGCCTTAACGGCACTCCAGCTAGTGTCGGAGGCTATGGTTATCTTCTTCAGCCACTTTGGTGGATCGGAATGATTACAATGATTGTCGGCGAGATTGCGAATTTTGTAGCATATATTTATGCCCCTGCCGTGCTTGTTACTCCGCTTGGTGCTTTGAGTATCATTGTCAGTGCTGTGTTGGCTCATTTCATGTTGGGTGAGAAGTTACAGAAAATGGGCATGCTTGGGTGTCTTCTATGCATTGTTGGATCCACTGAGATCGTGCTCCATGCACCCCAAGAAAGGTCTCTTAGTTCTGTGCTGGAGATATGGCTTTTGGCTGTTCAACCAGCTTTTCTCTTGTACATAGCCTCGGCAATGGCTCTGTCATTCTTTTTGATTTTTTACTGCGCACCTCGCTATGGCCAAACCAATATCTTTGTTTATATTGGAATATGCTCCATAATTGGATCATTGACTGTCATGAGTGTAAAAGCGATTGGCATTGCCATTAAACTTACATTAGATGGTTCAAATCAATTTGTCTACTTTCAAACATGGATTTTTATAGTGGTCGGCGTTTCCTGCATCATTACTAATTTAAATTACCTTAATATGGCATTGGATACTTTCAACACAACGGTCGTTTCTCCAATCTATTATGCATTGTTCACTTCTTTTACAATATTAGCCAGCGCAATCATGTTTAAGGACTATTCGGGACAAAGTATAAGCAGTATTGCATCGGAGCTATGTGGTTTCATCACTGTTTTATCTGGAACAACTGTATTGCACTGCACTAGACTACCGGATCCTCCAGTTAGTACAGTGCAGATGTGTACAGTCCCCTGTCTCCAAAAGTATCATGGTATTTCCAACCAGGAAACGGCGAACCCTGGAAACAGAAAGAAGAAGATGGACCGCCCCTTAATTTAA 1014 0.4221 MYSSNLIGFILAVVSGAFIGSSFIIKKKGLQRAGLNGTPASVGGYGYLLQPLWWIGMITMIVGEIANFVAYIYAPAVLVTPLGALSIIVSAVLAHFMLGEKLQKMGMLGCLLCIVGSTEIVLHAPQERSLSSVLEIWLLAVQPAFLLYIASAMALSFFLIFYCAPRYGQTNIFVYIGICSIIGSLTVMSVKAIGIAIKLTLDGSNQFVYFQTWIFIVVGVSCIITNLNYLNMALDTFNTTVVSPIYYALFTSFTILASAIMFKDYSGQSISSIASELCGFITVLSGTTVLHCTRLPDPPVSTVQMCTVPCLQKYHGISNQETANPGNRKKKMDRPLI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03294 337 Pfam Magnesium transporter NIPA 5 294 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vifa2g03294 337 PANTHER UNCHARACTERIZED 4 294 IPR008521 GO:0015095|GO:0015693|GO:0016020
Vifa2g03294 337 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03294 Vifa-Chr2 946591079 946595575 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03294 K22733 - gmx:100783541 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03294 2 946591079 946595575 Vifa2g03294 2 946591079 946595575 ECH
Vifa2g03294 2 946591079 946595575 Vifa2g03294 2 946591079 946595575 PCT