Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03275 ATGGAAAGAAGGAGTTTGATATGGCACAGTAAAAGTTCTGGTGAAACTGAGAGTTCTGAATCAATGTCATCTCATTCTGAAAGATTATCTGATGATCTGGTATATGGTACTCGAACTTCCTCGTCTCTGGAAGTCACGTCCAAGGTTGCGTCAGACGAAGAGGTTGTTCCTGATGTGCTTACTTTAACTGAAAAATTATCTGCTGCTCTATTAGATGTTAGCTCCAAAGAAGATTTGATAAAGCAAAATGCTAAAGTTGCTGAAGAAGCTGTCTCAGGTTGGGAGAAGGCTGAAAATGAAGTATTGACTTTAAAGCAAGAACTTGACGCTGCAAAACAAAAGAATGTTGTTCTTGAAGACCGAGTTAGTCATCTTAACGGGGAACTAAAGGATTGTATGAGGCAGCTCCGACAAGCTCGAGAAGAGCAAGATCAAAAGATCCATGAAGCTGTTGCAAATAACTCTTGGAATCAGGAATCCGAAAGACCTGATCTTGAGTGGAAAGTTGCTGAGCTTGAGGCTCAATTTCAAACAGCTAAAGAAAATGCTGCTACATCAGTTAATTCTGGTCTAATGCAGAGGCTTGAGGATGTGGAGAGGGAGAATTCATGTCTTAAACTTGAACTGCAATCTCGACTGGAGGAGCTAGAATTCAAAACCATTGAAAGGGATTTGAGTACCCAATCAGCCGAAACAGCAAGCAAGCAACATTTGGAGAGTTTAAAGAAGGTGGCTAAGCTTGACACTGAGTGCCGGAGACTTCATGCCATGGCTCGGAAAACATTCTCTGCCAATGATTACAAGTCTTTGACTCACTCTTCAGTTTGTGCAGAGTCTTTCACAGATAGCATGTCAGATAGTGGAGAGATGCTAGTTGAAACTGATGTTTCCAAATTTGGAGGCTGGGAGATAAACGAAGGTGAAAACACCACTGCACAAAATTATCTAGGCCTTTCAACTCAGAATGATCTGATGGATGATTTCCTTGAAATGGAAAGGCTTGCGGCATTGCCAGATTCGAAAAGTGTAAGCAGTTTCTTTGTGGTAGGTAATGGAACAGACAAAATGAATGCTGAAGTGGAAGCATTTGTTCAAAAGAATTCTACATTGGAAAAGAAGCTGGTGAAAGTGGAGGCAGATAAACTTGAGCTAGAGATGGATTTAAACGAATGCCAAAAACAGCTGGAGGTATCACAAAGTCGAGTAAAGGAAACAGAATTGGAGGTAATAGAGCTTCAAACTCAGTTAGATCTTGCGAATAAATCAAATGAAGAAGCATATGAACTAGAAGCAGCCCGAGCAAAAAATGAAAAAGCTGAATCAAAACTTAGAGCAGCCCAAACCGAGGCAGAAGAATTGATCTCAAAAATATGTTCACTGGAGGAAGAGATTGAGAAAGAGCAGGCTTTGTCTGCTGAGAATTTGGCCAAGTGTGAAAAGATGGAAGATGATTTTTTGAGAATGAAGCAAGAAAATCAACTCCAGCAAGACACTGATATATTGCATAGGGAAGGTGTTGATAGCAAGTTAATGTTCAATCAGGAGAAGGAATTAGAATTGGCTGCTAGTAGATTTTCCGAGTGCCGGAAAACCATTGAATCTCTGGGAGACAAGTTGAAGTCCCTTGCAAAATTGGAAGACTTCCTACTTGATTCAGAGGACACTATGGAGTTAACTAGTGAAGCAACATCACCAGGTCCCAAAAATAGCAACAAGCAGTTGAAATTACATAATAGTGATTTGAGTTTGCCAAAAATAGATTCTGAACCGTCAAATTCGCTAAATCCATCTATTAGCTTTGGAAAAAAGCACTTTAGTTTTGGTATGTTCTATCCTACAAGTGCTTGA 1848 0.401 MERRSLIWHSKSSGETESSESMSSHSERLSDDLVYGTRTSSSLEVTSKVASDEEVVPDVLTLTEKLSAALLDVSSKEDLIKQNAKVAEEAVSGWEKAENEVLTLKQELDAAKQKNVVLEDRVSHLNGELKDCMRQLRQAREEQDQKIHEAVANNSWNQESERPDLEWKVAELEAQFQTAKENAATSVNSGLMQRLEDVERENSCLKLELQSRLEELEFKTIERDLSTQSAETASKQHLESLKKVAKLDTECRRLHAMARKTFSANDYKSLTHSSVCAESFTDSMSDSGEMLVETDVSKFGGWEINEGENTTAQNYLGLSTQNDLMDDFLEMERLAALPDSKSVSSFFVVGNGTDKMNAEVEAFVQKNSTLEKKLVKVEADKLELEMDLNECQKQLEVSQSRVKETELEVIELQTQLDLANKSNEEAYELEAARAKNEKAESKLRAAQTEAEELISKICSLEEEIEKEQALSAENLAKCEKMEDDFLRMKQENQLQQDTDILHREGVDSKLMFNQEKELELAASRFSECRKTIESLGDKLKSLAKLEDFLLDSEDTMELTSEATSPGPKNSNKQLKLHNSDLSLPKIDSEPSNSLNPSISFGKKHFSFGMFYPTSA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03275 615 Coils Coil 360 456 - -
Vifa2g03275 615 MobiDBLite consensus disorder prediction 556 597 - -
Vifa2g03275 615 Pfam Filament-like plant protein, long coiled-coil 180 260 IPR008587 -
Vifa2g03275 615 Pfam Filament-like plant protein, long coiled-coil 364 543 IPR008587 -
Vifa2g03275 615 Pfam Filament-like plant protein, long coiled-coil 76 183 IPR008587 -
Vifa2g03275 615 Coils Coil 94 153 - -
Vifa2g03275 615 Coils Coil 162 182 - -
Vifa2g03275 615 MobiDBLite consensus disorder prediction 1 33 - -
Vifa2g03275 615 Coils Coil 188 215 - -
Vifa2g03275 615 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03275 Vifa-Chr2 938929407 938931876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03275 - - psat:127079096 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03275 2 938929407 938931876 Vifa2g03275 2 938929407 938931876 ECH