Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03246 ATGTCATCCAAAGGATCTTTACATTTCACCAAAACTTCTTCCCTCAACTTCGATTCAACTTCCCGCTCTCCCAATCAAGATTCCGCTCTCTTCTCCAATCTCTTCAATGTCGATTCCATTCCTCGAAGCTCCAGCTCCGGTTTCGCTTCACATTCCGTCAACTCACCTGTCTACGATAAACCTGTTTACGATAATGGTAGGGGATCACGCCACGACGGAAGGACCGCCGCGGTTGACTATCTTCTCGGCGGATTCGGTAATTCCAAGAATACCGTGAAGAATGAGAGAGGCGTGAATGACTTTGATGATTTGATCTCTGGATTTGGGAACAGTAAGCCCTCCTCCCGTCAAAGGCCCACTCCTGATATTGGTTCATCATCAAAATCTACTTTCAGTGCATCTGAAACAGCCTCCAATACAACAAAAGACCCTTTCAAAATATTTGAATCAGCTTCTGCTCCAACTGGTTCATCCTCAAGGCACTTTACAGACCCATTAGAAGAAATTAGTAAATTTACTAGTTCTAGAAGCACAAAAATTGATTTTTCATCCGATTCTAATGGTGGAGTATATGATGATACTGATTCCTTTGATGGACTTGGAAATTCAGTACCAGCATTTTCATCAGAGAGGACCTGCAGGAATGGTACCAGTTCCCCAATGCCGAGGTCAAACACAATTTCAAGTTGGACCCGAGATAAAGAATCATTTGAAAAATTGTTTGTCAGAAGTCCTGATAGACGGACACATAACAAGATTCCTGTTGGACATGATCAGGAGTTTCATCAAACTCCATATGGCATGCCTACATATTCATCTGATTCGAATAAACCAGTAGTTGACCAAAGGTCTCAGAAATATGAAGAAAAGTTAGTCTCAGATGATGATATATGGCTAACGGTATCAGAGATTCCTCTTTCCACACAACCAACTGCTGCTCCACCACCCTCAAGACCACCTCCTCCTCGACCAGTTCATATCCCCATGTCAGAAACAGGTTCACCAGCTTTTGCCAATGTCAGGAAAGACAACGGATTTTCTTCTTTCCCAAGTTCCACTCGATTTTCTCAGGATCCTAAATATGCTCCTGCTACAGCCAAGTTATCTTCTGCGTCACAGTTTGATGAACTTGAAGATTTTGCCATGGGCACGAGTCACGGTGATGATGATGAATGTGAAAATGGTGATCCTGATAAAGAATTAGAGATGAACTCAGCTGCTACAGCTATGAAGGAGGCTATGGAGAGAGCTGAATCTAAATTTAGGCATGCAAAGGAAGTTAGGGGGAGTGAGAATACAAAACCTGCTCGAAGCAAAGAATCCGTACATTCGGAGAAAGGTGACAGAGCTGTGCCAGAGGAGAGAGGCAGGTTAGACCATGAGCAGAAGCAAAAAGAGATGGAGGAAATGGAGCGAAGAAGAATTGAGAGGGAAAGGGAGGAGAAACAAAGAGAACAACAGCGACTTGAGAGAGAAAGAGATAAAGCAAGACATGCTGTGGAAAGAGCTGCTAGAGAAGCACGTGAAAGAGCAGCTGCTGAAGCTCGCCAAAGAGCTGAGAAGGCTGCTGTTGAGAAAGCTAATGCAGAAGCTAGAGTGCGTGCTGAAAGGGCCGCAGTTCAGAGGGTACAAGCTGAAGCCCGTGAAAGGGCTGCTGCTGAAGCAAAGGAAAGGGCAGAAAAGGCTGCTGCAGGGGCAAAGGGGAGAGAAGCACGAGAAAGAGCTGCAGCTGCAAGGACTGAAGCTGAAACGCGAGTTAAAGTAGAACGTGCTGCTGTAGAAAGGGCTGCCGCAGAGGCCCGAGAAAGAGCTGCAGCTGCTGCTAGAATGTACCAGCAAAAAAAGGAAAACGATCTTGAATCGTTCTTCAGCATGAGCGGACGGGCCAACAGTGCTCCAAGACCTCCTAGATCTAGTTCTTCTGATTCAGATTTCGATGCCCAGTTTCAGCCAGATGTAAGCCATACAGGCTTGTCGTCAAACATAAAGAAGGCATCGTCATCAAATAATATTGTTAATGATCTTTCCTCAATTTTCGGAGCTTCTTCCTCAACTGGAGGATTTCAGGAAGTTGAAGGGGAAAGTGAAGAAAGACGAAAAGCCAGGTTGGAACGCCTTCAAAGGGCTCAGGAGCGTGCAACAATAGCATTGGCTGAGAAGAATCAACGGGACCTACAGACTCAAAGAGAGCAGGCTGAGAGACATAGGTTTGCGGAAACACTGGATTTTGAAGTTAAACGCTGGGCTGCAGGAAAAGAGGGGAACTTGTGTGGTTTACTCTCCACCCTACAATATGTGTTATGGCCTGAATGTGGTTGGCAAGCAGTTTCTTTGACTGATCTTATTACAGCCGCTACTGTTAAAAAGGCTTATCGGAAAGCTACACTGTGCATTCATCCTGATAAAGTGCAGCAGAAGGGTGCCACTCTTCAACAGAAGTATATTGCAGAGAAAGTTTTTGATCTACTTAAGGAGGCATGGAATAAGTTCAACTCAGAGGAGGTTTTTTAA 2511 0.4496 MSSKGSLHFTKTSSLNFDSTSRSPNQDSALFSNLFNVDSIPRSSSSGFASHSVNSPVYDKPVYDNGRGSRHDGRTAAVDYLLGGFGNSKNTVKNERGVNDFDDLISGFGNSKPSSRQRPTPDIGSSSKSTFSASETASNTTKDPFKIFESASAPTGSSSRHFTDPLEEISKFTSSRSTKIDFSSDSNGGVYDDTDSFDGLGNSVPAFSSERTCRNGTSSPMPRSNTISSWTRDKESFEKLFVRSPDRRTHNKIPVGHDQEFHQTPYGMPTYSSDSNKPVVDQRSQKYEEKLVSDDDIWLTVSEIPLSTQPTAAPPPSRPPPPRPVHIPMSETGSPAFANVRKDNGFSSFPSSTRFSQDPKYAPATAKLSSASQFDELEDFAMGTSHGDDDECENGDPDKELEMNSAATAMKEAMERAESKFRHAKEVRGSENTKPARSKESVHSEKGDRAVPEERGRLDHEQKQKEMEEMERRRIEREREEKQREQQRLERERDKARHAVERAAREARERAAAEARQRAEKAAVEKANAEARVRAERAAVQRVQAEARERAAAEAKERAEKAAAGAKGREARERAAAARTEAETRVKVERAAVERAAAEARERAAAAARMYQQKKENDLESFFSMSGRANSAPRPPRSSSSDSDFDAQFQPDVSHTGLSSNIKKASSSNNIVNDLSSIFGASSSTGGFQEVEGESEERRKARLERLQRAQERATIALAEKNQRDLQTQREQAERHRFAETLDFEVKRWAAGKEGNLCGLLSTLQYVLWPECGWQAVSLTDLITAATVKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKEAWNKFNSEEVF 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03246 836 FunFam Auxilin-related protein 1 706 835 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 303 521 - -
Vifa2g03246 836 Coils Coil 703 735 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 551 587 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 625 662 - -
Vifa2g03246 836 CDD DnaJ 783 828 IPR001623 -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 413 521 - -
Vifa2g03246 836 Coils Coil 597 617 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 1 24 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 309 328 - -
Vifa2g03246 836 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 536 834 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 44 73 - -
Vifa2g03246 836 SUPERFAMILY Chaperone J-domain 665 834 IPR036869 -
Vifa2g03246 836 Coils Coil 453 562 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 201 231 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 265 280 - -
Vifa2g03246 836 ProSiteProfiles dnaJ domain profile. 771 835 IPR001623 -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 104 231 - -
Vifa2g03246 836 Gene3D DnaJ domain 703 835 IPR036869 -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 243 257 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 344 359 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 108 191 - -
Vifa2g03246 836 MobiDBLite consensus disorder prediction 243 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03246 Vifa-Chr2 930438594 930444531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03246 - - tpra:123916386 808.135