Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03184 ATGGTGAGGTTCTTAGGATTGACTCGTGCGGTGGATCAAGAACCCAGAGAAATCGTTTCACGGTCGAATCTGACGACCGAGTCCAGTGAAAATGGCTGGCTTATCAGATTCTTTGACTCTCCATTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGATCATGCTGGTGTGCGCGATTATCTCTGTAATAGAATGTACACACTTCCCTTGCAGGGAGTCGAGGGTTATTTGTTTCAAGTTTGTTATATGATGATACATAAACCCAGTCCCTCTTTGGATAAATTTGTTATAGATGTGTGCTCCAAGTCACTTAAGATTGCTTTGAAGGTGCATTGGTTCTTGTTGGCTGAGCATGAGGAATCTTATGACAATGATGGGATTAGTAGTATTCAGGACAAGTGTCAAACTGCAGCCACCTTTATGGGGGAGTGGCCACCTTTGATAAGGCCTCAAAGTGCATCTTTGAGCCCGCCAGGCAAGAACCAAGTTTTGAATAAAATATTGTTGTCGCTAACATCTTTGTCGCCTACGCAGAGATCTTTGTCGTTCTTGCCTTCTTCGGGAAACAATTTGCAAGAGGATAGTAGTTTGGAGTCTGTCGAAGAAAACAAGCTGTTTCGGAAATTTATGCCAGGCCCCAAGGTTAGAGATGCTTTGCTTTTTAGGAAGTCAGTTGAGAATTGTGATGAAGACTCTGAAAAGAATAATTTCCTTAAAAGGCTCTTAAGGGATAGTAGAGGGGATGATGAAGACTCTGAGGACGGTTTCTTTAAAAGGCTCTTGAGTGACAGTAAAGGTGGAGAGGATGAGGATCTGGCCTCAAGTTCAGAGGGATTTTTCAAGAGATTGTTTCGGGATAGCAAGAATGATTCCGAGGATAAAACACACACTCGAGCAATGGAAGATGAAGAAAAGGAGGGTTTTTTACGAAAGCTTTTCCGCGATAAATTTGAAGATAAGAAGGATGGAAATATTCGTAATTCTGAAGAGAAATGCGCAAAGCCTGCTGAAGAGGATGAAAAAGAAGGTTTTTTCCGGAAATTATTTAAGGATAAATTTGAGGACAAGAAAGCTATCAATGATAAAACTGAAGATGGTCGTGTGCACCCTGAAGATGGTAAAGGGGATTCAGCCAATGAAAACAATAATAGTGGCTTAGTTGAAAATAGTCCAGCCGCAGAATTTTTTTTCCGCAAATTGCTTAGAGATCGTGACCGTTCAATTGAAAATTCAGAGCAATTGGGGTTAAAAAAGGATAAAGAGAGCTGTCCTGGATCACCAAATCAGCAAAATGAGAAATCAGGAACAAAGCCCCCTCTTCCAGTTAATTTATCACAGTTTCGGAAAGGAGCTTACCACGGGTCATTGGATTTTGTGCTGTCACTGTGTGAGATATCATTTGGGTTAGTTGATGTTTTTCCAATTGAAGATCGCAAACGTGCTCTGCATGAGTCACTTGCAGAAATCAATTTGCATTTAACAGAGGCTCATAATACTGGAGGCGTTTGTTTTCCATTGGGAAAGGGAATGTACCGTGCACTTTATATTTCTGAAGAGGAAGCTGTTCTCTTGAACTCTAGGGAGAAGGCACCTTACCTGATCTGTGTTGAGGTCTTGAGATGTGAAACGCCCAGCATTTTCAGGGAGGCATCTAGGTCTCAGAAACATTCTAAAGGTGGAATCCCCTTGGCAAATGGAGACGCTCTCTTGCAAAAGCCACCCACTTGGGCTTATCCATCATGGACAGCACAAGAGGTATATCGTAATAGCAATGATAGAATGTCCAGATCAACAGCTCAGGCTATTGATCAGGCAATTACCGATGTGTCTGAGGCAAAAATCAGATTTGTTAGTGTGAATCTTTCTGTCCAAAGACAATCATATGGTCAGCTCGAGAAGACTAATGTGGATCCATCTGGTGTCGGTTGGTGTTCTGCTGCAGTTTATAGAGAGGGCATACAAGAAATGGAAAGACCAGAAAATGACAATGATGTGGAGTGGGTAAGGGTAGTGTTGAAAGCTGATCCTGGGGTTAGAATGGAAGATATTGAGAATCCAACTCCACGACGAAGAAAGGAGCATCGCCGTGTTCCAAGCACAGTAGCACTAGAGGAAGTAAAGGCCGCGGCAGCAAAAGGGGAAGCACCTCTTGGTCTCCCATTGAAAGGGGCTGGTCAAGATTCATCCGATGCACAGCCAGGAGCAAACGGAATTACTCCTAAAGCCAGCGATGCCTTGTCTGGTGAACTTTGGGAGGTAAAGAAAGAGAGGATAAAGAAGGCTTCTATACATGGAAACTTACCTGGTTGGGACTTGAGATCTGTTATTGTTAAGAGTGGGGACGATTGTAGACAGGAGCATCTGGCAGTTCAACTTATTTCACATTTCTATGATATTTTCCAAGAAGCTGGACTTCCTCTTTGGCTGCGGCCGTATGAAGTGTTATGCACTTCTTCTTACACTGCTCTTATTGAAACAATTCCAGATACGGCTTCTCTACATTCTATCAAAAGTAGATATCCCAGCATTTCAAGTTTACGGGAATTCTTTATTGCCAAGTATCAAGAAGATTCTCCTAGTTTTAAACTTGCTCAGAGGAATTTTGTTGAAAGCATGGCTGGTTATTCTTTGGTTTGCTACCTTCTGCAGGTGAAGGATAGGCATAATGGGAACCTCTTATTGGATGAAGAAGGCCATATCATACATATCGATTTTGGCTTCATGCTTTCCAATTCACCCGGTGGTGTTAATTTTGAGAGCGCACCTTTCAAATTAACTCGGGAGCTTCTTGAGGTTATGGACTCTGATGCTGAGGGACTTCCAAGCGAGTTCTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACTTGCCGTAAGCATGTCGAGCGTATTATTCTTCTAGTTGAGATGTTGCAGGATTCTGGTTTCCCCTGCTTCAAAGGTGGTCTACGGACAATTCAGAACCTAAGAAAGCGATTCCATCTCAGTTTAACAGAAGAGCAATGTGTATCTTTGATGCTTTCACTTATTAGCAGCAGTCTTGATGCATGGCGAACGCGGCAGTATGATTATTACCAGAAGGTTTTGAATGGAATATTGTAA 3117 0.4232 MVRFLGLTRAVDQEPREIVSRSNLTTESSENGWLIRFFDSPFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGVEGYLFQVCYMMIHKPSPSLDKFVIDVCSKSLKIALKVHWFLLAEHEESYDNDGISSIQDKCQTAATFMGEWPPLIRPQSASLSPPGKNQVLNKILLSLTSLSPTQRSLSFLPSSGNNLQEDSSLESVEENKLFRKFMPGPKVRDALLFRKSVENCDEDSEKNNFLKRLLRDSRGDDEDSEDGFFKRLLSDSKGGEDEDLASSSEGFFKRLFRDSKNDSEDKTHTRAMEDEEKEGFLRKLFRDKFEDKKDGNIRNSEEKCAKPAEEDEKEGFFRKLFKDKFEDKKAINDKTEDGRVHPEDGKGDSANENNNSGLVENSPAAEFFFRKLLRDRDRSIENSEQLGLKKDKESCPGSPNQQNEKSGTKPPLPVNLSQFRKGAYHGSLDFVLSLCEISFGLVDVFPIEDRKRALHESLAEINLHLTEAHNTGGVCFPLGKGMYRALYISEEEAVLLNSREKAPYLICVEVLRCETPSIFREASRSQKHSKGGIPLANGDALLQKPPTWAYPSWTAQEVYRNSNDRMSRSTAQAIDQAITDVSEAKIRFVSVNLSVQRQSYGQLEKTNVDPSGVGWCSAAVYREGIQEMERPENDNDVEWVRVVLKADPGVRMEDIENPTPRRRKEHRRVPSTVALEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPGANGITPKASDALSGELWEVKKERIKKASIHGNLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPSISSLREFFIAKYQEDSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGLPSEFFDYFKVLCIQGFLTCRKHVERIILLVEMLQDSGFPCFKGGLRTIQNLRKRFHLSLTEEQCVSLMLSLISSSLDAWRTRQYDYYQKVLNGIL 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03184 1038 Gene3D - 657 830 - -
Vifa2g03184 1038 MobiDBLite consensus disorder prediction 426 444 - -
Vifa2g03184 1038 SUPERFAMILY Protein kinase-like (PK-like) 501 1032 IPR011009 -
Vifa2g03184 1038 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Vifa2g03184 1038 MobiDBLite consensus disorder prediction 363 379 - -
Vifa2g03184 1038 Gene3D - 835 1036 IPR036940 -
Vifa2g03184 1038 FunFam Phosphatidylinositol 4-kinase beta 1 835 1036 - -
Vifa2g03184 1038 PANTHER PHOSPHATIDYLINOSITOL KINASE 33 1038 IPR015433 GO:0046854|GO:0048015
Vifa2g03184 1038 CDD PI4Kc_III_beta 746 1038 - -
Vifa2g03184 1038 FunFam phosphatidylinositol 4-kinase beta 1 671 830 - -
Vifa2g03184 1038 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 874 894 IPR018936 GO:0016301
Vifa2g03184 1038 MobiDBLite consensus disorder prediction 415 445 - -
Vifa2g03184 1038 SMART pi3k_hr1_6 777 1036 IPR000403 -
Vifa2g03184 1038 MobiDBLite consensus disorder prediction 720 744 - -
Vifa2g03184 1038 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 752 1023 IPR000403 -
Vifa2g03184 1038 MobiDBLite consensus disorder prediction 363 390 - -
Vifa2g03184 1038 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 780 794 IPR018936 GO:0016301
Vifa2g03184 1038 Pfam Phosphatidylinositol 3- and 4-kinase 777 984 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03184 Vifa-Chr2 915789847 915811105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03184 1 1037 Lipid Metabolism Gene Families AT5G09350 64.991 0.0 1383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03184 K19801 - gmx:100781715 1640.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03184 2 915789847 915811105 Vifa2g03184 2 915789847 915811105 ECH