Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03143 ATGATGACATCTTCTCCAACACACACTGAAGCTGCAAAAACCGAACAAATCATAACCGAATTCTTCGCAAAAAGCCTCCATATAATACTAGAATCAAGAGCACTTTCTGCTTCATCGCGTAATTTCAGCACCCTCTCTTCACCATCTTCAACCTCTTCATCCTCCTCCTCCAGCGTTCGTCCTAGAGATAAATGGTTCAATCTAGCTCTCAGAGAATGTCCTACAGCGCTTGAAAACGCTGACCTATGGCGCCACAACAATCTTCACCCGATTGTGGTGGATATTGTTTTGGTTCACAGAATCATGCAATTGGATTTAAAAGTACGAAACCCTTTTGAAGAATTTGGAGTTGGGGGTTCACAGAGTGAGAAGATTGTAGAGAGATGGGTGATTCAGTATGAAAGCAGAAAAACTAGGGATTGTTCTAATTCTTCTAGTCCAAGTTCAAGCAGTACGAGAAGGTCAAGTAGCACTTTTTTGCAAAATTTGTATAAAAAAGCTACTTTGCTTATAAGGTCTTTGTATGCTACTGTTAGGATTTTACCTGCTTATAAGATTTTCAAGGAACTTAATTCTTCTGCAAATGTTTGTGCTTTTACTCTTGCTCATCGCGTGTCTACTTTTTTTGAACCGTTTACCTCTAAACAAGAGTCTGAAATGCTTAAATTTGTGTTTACCCCTGTCAATACTTTATTTGGTAGGCTATGTCTTTCGGTAATGTATTGTCAGTGTGTTTCTGATGTGAGTTCTGAATCATCGTCGACGCCTTTATCTCCGCGAGTTATAACTGATTATGTCGGTAGTCCTATGACCGAGCGGTTGATGCGGTTTCCATCGCTACCGGTGGTACCGGTTAGATTGCCATTACATGGCTCTCCATCATCGTTGCCGTTTTCGAGGAGACATAGTTGGAGTTTTGAAAATGGTAGAGGCTCGCCTCCTTCTGTTAATTATTGTTTGCCTTCACCTACTCATTCGGAATTGAACACATTGGTTTCTAATGCTAGTTATCAGTGTTATCCACCACCCTCTAGTTTGCCTCATCATCCAAGTGAAATGGCTTTGCTTCACAAGAAGAATGTGAATTTCGATGATTACTATCCCTCGCCAAATTTCTCTCCATCTCCCTCGCCTTCACCATCATCTCCAATCTATCATTTGGGATCATTAGCTTCAAAAACACTTTTACGCTCCGAAAGTGCTCCCGTCAATATACCTAATGCTGAAGTTGCGAATTCCCCTGGACATACGAGTAGGCATAATTTGCCACCATCTACTCCCATTAGAATTTCAAGGTGTACTTCCGAGACAGATGGGAGTAGGAATCTTATGCAATTGTGCACACCAGCTGAGAAGATGTGTTCTCTAAGAAAAGATGAGTCTCAAAAGTATTCTGGAGTGAAGATAGTACCTAACAGCTCGCCACAGATTTCATTTTCCAGGAGCTCTAGCAGGTCATATCAGGACGATTTTGATGATACTGATTTTATTTGTCCTTTTGATGTGGATGATGACGATACAACAGACCCTGGCAGCAGAGCGGAATCTTTTGATCCTGGTGACATGACTCAACTGCTCGAAGCTGGTAGATTCCTTCCAATCAGAAAGTCTCAAGGTGCTGTTGTTGGTGCACTTGTAAATATGTTGAAGAAAGCAGCACCTCTACATCAAGACTTCTCCTCTACATGTGAAAACATATCGCGTCCTGAAACGCAGAAGAGCAATAAAGTTCAAGGGCCTAACCAGATTCCGGATACCCTATCAGCGCCGAGCATAATGTGTTCTGGTAATAGGAAAACAACAAATGATGCATTGGAAGAATTTCGTAGTTATAGAGAAATGAAAAACATGTTACTTAAGCCGCGCGGTGGTAATAGTAACCAACAAATATAG 1893 0.4136 MMTSSPTHTEAAKTEQIITEFFAKSLHIILESRALSASSRNFSTLSSPSSTSSSSSSSVRPRDKWFNLALRECPTALENADLWRHNNLHPIVVDIVLVHRIMQLDLKVRNPFEEFGVGGSQSEKIVERWVIQYESRKTRDCSNSSSPSSSSTRRSSSTFLQNLYKKATLLIRSLYATVRILPAYKIFKELNSSANVCAFTLAHRVSTFFEPFTSKQESEMLKFVFTPVNTLFGRLCLSVMYCQCVSDVSSESSSTPLSPRVITDYVGSPMTERLMRFPSLPVVPVRLPLHGSPSSLPFSRRHSWSFENGRGSPPSVNYCLPSPTHSELNTLVSNASYQCYPPPSSLPHHPSEMALLHKKNVNFDDYYPSPNFSPSPSPSPSSPIYHLGSLASKTLLRSESAPVNIPNAEVANSPGHTSRHNLPPSTPIRISRCTSETDGSRNLMQLCTPAEKMCSLRKDESQKYSGVKIVPNSSPQISFSRSSSRSYQDDFDDTDFICPFDVDDDDTTDPGSRAESFDPGDMTQLLEAGRFLPIRKSQGAVVGALVNMLKKAAPLHQDFSSTCENISRPETQKSNKVQGPNQIPDTLSAPSIMCSGNRKTTNDALEEFRSYREMKNMLLKPRGGNSNQQI 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03143 630 MobiDBLite consensus disorder prediction 406 429 - -
Vifa2g03143 630 Gene3D HORMA domain 3 247 IPR036570 -
Vifa2g03143 630 MobiDBLite consensus disorder prediction 41 60 - -
Vifa2g03143 630 Pfam Autophagy-related protein 13 18 243 IPR018731 GO:0006914|GO:1990316
Vifa2g03143 630 PANTHER UNCHARACTERIZED 2 628 IPR040182 GO:0000045
Vifa2g03143 630 MobiDBLite consensus disorder prediction 567 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03143 Vifa-Chr2 904379569 904386818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03143 K08331 - gmx:100798585 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03143 2 904379569 904386818 Vifa2g03143 2 904379569 904386818 ECH