Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03109 ATGACTTCTACTGCAACCACCTCTCTATTCATCTTCCCCGAGTTCCAATTCAAGTTTAACCATTCACTTCTTCTTCCACGGATTCACACCCGCAAAAAACCCCTATCACTTTCTCTTCAACCATCCAAACTCCGCGCAACCCATTTCTCACTCTGCACTTTTTCCCGCACCTCAATCAAGCCCTCTTCAAGTTTCTCACCTCAAATCAGTTTAACCAACTTTATTTCACAAAAAGTCGCGTTTTTTCTTATTGGGTCGTTTATCTTCACCGGTTACTTCAACAAAAGACCCGCTTTTGCAGTTACAGTACCTTCTGTCAGTTCTGCTGAAACGTTGGAGGAGAAGATTCTGGAGAAGGATCCGAGAGATGTTGAGGCTCTAAAGGTGACTGTGTATGGGAAAATCAGGAGAGGGAAGTGTAAGGAAGCTGAGAAGTTTGTGAAGAGGTTGATTGATAAGGAACCGAATGAAGTTGAGTGGAGGCTTTTGCTTGCACTGTGTTATGAGACAATGGGGTACTTGAGTAAGGCTAAGGGATTGTATTTGGAAATCTTGGAGAATAGGCCTCTTCTTGTTAGAGCTTTGCATGGTCTGGCTATGGTGATGCACAAAAACAATGAAGGTCCTGCCGTATTTGAAACACTGAACAAAGCTCTAGAGTTAGCTATTCGTGAAAACAAAGTTACCGAGGAGAGAAATATAAGAATCTTAACTGCACAAATGCTTGTTGTACAGGGTGATTTGGAGGAGGGCTTAAAAAGATGTCAAGATTTGATCGATCAAGATCCCCGCGATTTTAGACCTTATCTTTGCCAGGGAATAATATACAGTCTTCTGGATAAAAAGGAGGAAGCTGCGAAACAGTTTGAAACATATCAAGCTCTAGTGCCTCAAGAGTTTCCTCAGAAGGGATTTCTTGATGATATCACCTTAGCAGCAAAAGAAACATCTCAAGTACAGTTTCAGAAGGAATTCAGAAATCAATTTTCTAACCAAAAATAG 1002 0.4132 MTSTATTSLFIFPEFQFKFNHSLLLPRIHTRKKPLSLSLQPSKLRATHFSLCTFSRTSIKPSSSFSPQISLTNFISQKVAFFLIGSFIFTGYFNKRPAFAVTVPSVSSAETLEEKILEKDPRDVEALKVTVYGKIRRGKCKEAEKFVKRLIDKEPNEVEWRLLLALCYETMGYLSKAKGLYLEILENRPLLVRALHGLAMVMHKNNEGPAVFETLNKALELAIRENKVTEERNIRILTAQMLVVQGDLEEGLKRCQDLIDQDPRDFRPYLCQGIIYSLLDKKEEAAKQFETYQALVPQEFPQKGFLDDITLAAKETSQVQFQKEFRNQFSNQK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03109 333 Gene3D Tetratricopeptide repeat domain 105 231 IPR011990 GO:0005515
Vifa2g03109 333 Gene3D Tetratricopeptide repeat domain 232 323 IPR011990 GO:0005515
Vifa2g03109 333 Pfam Tetratricopeptide repeat 137 195 - -
Vifa2g03109 333 SUPERFAMILY TPR-like 121 298 IPR011990 GO:0005515
Vifa2g03109 333 PANTHER TRANSMEMBRANE PROTEIN 212 302 - -
Vifa2g03109 333 Coils Coil 212 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03109 Vifa-Chr2 889218197 889220306 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03109 - - gmx:100795327 424.861