Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03096 ATGCGCGTCTCACGTGAGTTCGCCGCTGCTGGTGTCGTCGACGGCAAGATTTACGTCATCGGCGGTTGTGTTCCTGATAATTGGTCTAGGTCAGCTAATTGGGCGGAGGTATTTGATCCTGTTACCAACAGGTGGGAAGGCATTCCCAGCCCGCCGGAGATTCGCGAGAAGTGGATGCACGCCAGCGCCATTGTGGACGGTAAGATTTACGCCATGGCTGACCGCGGTGGTGTTTCGCTTGATACTCGTAGCGGCGCGTGGGAGAGTGTGGGGAGTGAGCTTGACCTAGGGTGGCGTGGGAGAGCGTGTGTTGTGAATGGGATTCTGTATTGCTACAATTACTTGGGGAAAATCAAAGGGTTCGATGTGAAAAAAGGGTTGTGGAAGGAATTGAAGGGTTTGGATAAGGGTTTGCCGAAGTTTCTTTGTGGGGCAACAATGGCTGATGTTGGTGGAAAATTGGTTGTGGTTTGGGAGTGCCAAGGGAATGGGAATGGGAATGGAAAGGGGAAAGAAATGGAGGTTTGGTGCGCTGAGATTGATGTGAACAAGAACAAAGATGGGGAGTTGTGGGGTAAAGTTTGTTGGTTGAATAAAGTTCTCTCTGTTCCAAAAGGATCCTCCATTGTTCATTGTTCTTCTGTTGCCTTGTGA 654 0.5015 MRVSREFAAAGVVDGKIYVIGGCVPDNWSRSANWAEVFDPVTNRWEGIPSPPEIREKWMHASAIVDGKIYAMADRGGVSLDTRSGAWESVGSELDLGWRGRACVVNGILYCYNYLGKIKGFDVKKGLWKELKGLDKGLPKFLCGATMADVGGKLVVVWECQGNGNGNGKGKEMEVWCAEIDVNKNKDGELWGKVCWLNKVLSVPKGSSIVHCSSVAL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03096 217 Gene3D - 1 189 IPR015915 GO:0005515
Vifa2g03096 217 SUPERFAMILY Kelch motif 1 200 IPR015915 GO:0005515
Vifa2g03096 217 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 201 - -
Vifa2g03096 217 Pfam Kelch motif 5 52 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03096 Vifa-Chr2 885161963 885162616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03096 1 201 Miscellaneous Gene Families AT4G33900 34.135 1.65e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03096 - - aip:107604821 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03096 2 885161963 885162616 Vifa2g03096 2 885161963 885162616 ECH