Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03094 ATGTCTTTGACTCTCAGTCTCACCATTACAACACCGCGTTTCTCACAATCACACTGCTGGAACTCATCGCCCATTCTCAAATTCAAACCCAATTCACCACTTTCTATCACTCGTGCTTCTTCCTCTATGTCTACCACCTCCTTATCGCATCTCAGCGTCGACGAAGATTTACCGCCAAATTACGGAGACTGGCTTCCCAAACCCGAACTTCACCTCCGTAGAAGAGCCGGTATTCTCCTCCATCCGACGTCGTTTAAAAGCCCCTACGGAATCGGCGATCTTGGAATTGAGGCAGTTCGTTTCATTGACTGGCTTCACCGAACCGGTTGCTCTGTTTGGCAGGTTCTTCCTCTCGTGCCGCCCGGAAGAAAGGCTAACGAAGAAGGATCACCTTACTCCGGCCAGGATGCGAATTGTGGTAACACACTCTTGATTTCTCTTGAAGAGCTTGTTGAGGATGGATTGTTGGACAAACACGACCTTCCTGAACCAATTGATGCCCAGCGTGTGAATTTTTCGGTTGTTGCTGAACTTAAGGATCCTTTGATAACTAAAGCGTCAGAGAGGCTTATTTCAAGCAAAGGGGAACTCAAAACACAGCTTGAAAATTTTCGCAGGGATCCTAACATATCAAGTTGGCTTGAAGATGCAGCTTATTTTGCTGCTATTGATGACAGTTTGAACACACTCAGCTGGTACGATTGGCCCGAACCTTTAAAAAACCGCCACCTTGTAGCTCTAGAAGATATTTATCAACAAAAGAGAGATTTTATAAATATATTTATTGCTCAACAGTTCTTGTTCCAAAGACAATGGCAGAAAGTTCGCAACTATGCACAGAGTAAGGGAGTCAGAATAATGGGAGACATGCCCATTTATGTTGGGTATCACAGTGCAGATGTTTGGGCAAATAAGAACCAGTTTGCACTGAACAAGAAAGGATTTCCTCTTTTAGTCAGTGGTGTGCCTCCTGATGCATTCAGCGAAACTGGTCAGCTGTGGGGAAGCCCCCTGTATGATTGGAAAGCCATGGAGAAAGAGGGGTACTCATGGTGGATACGTCGCATACGACGTGCACAAGATATATATGATGAATTTAGAATTGATCACTTTAGAGGACTTGCTGGATATTGGGCTGTTCCCTCTGAAGCAAAAATAGCTATGGTTGGAAAGTGGAAGGTAGGACCTGGAACATCCTTCTTTGATGCCATTTCCAAAGCTGTTGGAAAGATTAATATCACAGCAGAAGACTTGGGAGTTATCACTGAAGATGTAGTGCAACTAAGGAAATCCATTGGAGCCCCTGGAATGGCCGTCCTCCAGTTTGCGTTTGGAGGTGGTCCTGATAACCCTCATTTGCCTCATAATCACGAGTGCAATCAAGTTGTCTATACAGGGACTCATGACAATGACACGATTAAGGGTTGGTGGGAAGCTTTAAACCAAAAAGAGAAATCACATGTATTAAGTTATATTTCAATAACCGAGCAAGATGATATTCCTTGGGCACTAATCCAGACAGCGGTGGCTTCTGTTGCTCAAACAGCAATAATACCTATGCAAGATGTTCTTGGACTCGGGAATTCTGCCAGGATGAATATTCCTGCAACTCAGTTTGGAAACTGGGGATGGAGGGTTCCAAATTCTGTGAATTTTGACAGGTTAGACAGAGAGGCAACCAGATTAAAAGAGATGCTTTCATTGTATGGCCGGCTTTGA 1719 0.4433 MSLTLSLTITTPRFSQSHCWNSSPILKFKPNSPLSITRASSSMSTTSLSHLSVDEDLPPNYGDWLPKPELHLRRRAGILLHPTSFKSPYGIGDLGIEAVRFIDWLHRTGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVEDGLLDKHDLPEPIDAQRVNFSVVAELKDPLITKASERLISSKGELKTQLENFRRDPNISSWLEDAAYFAAIDDSLNTLSWYDWPEPLKNRHLVALEDIYQQKRDFINIFIAQQFLFQRQWQKVRNYAQSKGVRIMGDMPIYVGYHSADVWANKNQFALNKKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKEGYSWWIRRIRRAQDIYDEFRIDHFRGLAGYWAVPSEAKIAMVGKWKVGPGTSFFDAISKAVGKINITAEDLGVITEDVVQLRKSIGAPGMAVLQFAFGGGPDNPHLPHNHECNQVVYTGTHDNDTIKGWWEALNQKEKSHVLSYISITEQDDIPWALIQTAVASVAQTAIIPMQDVLGLGNSARMNIPATQFGNWGWRVPNSVNFDRLDREATRLKEMLSLYGRL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03094 572 FunFam 4-alpha-glucanotransferase, chloroplastic/amyloplastic 71 572 - -
Vifa2g03094 572 SUPERFAMILY (Trans)glycosidases 54 571 IPR017853 -
Vifa2g03094 572 Pfam 4-alpha-glucanotransferase 80 547 IPR003385 GO:0004134|GO:0005975
Vifa2g03094 572 NCBIfam 4-alpha-glucanotransferase 70 569 IPR003385 GO:0004134|GO:0005975
Vifa2g03094 572 Gene3D Glycosidases 71 572 - -
Vifa2g03094 572 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 40 572 IPR003385 GO:0004134|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03094 13 572 Glycoside Hydrolase AT5G64860 70.357 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03094 K00705 - gmx:100785271 957.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03094 2 885156530 885161082 Vifa2g03094 2 885156530 885161082 ECH