Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03067 ATGGATACTATACAAGAAAATTTGTTAGCGTCCTCCTCGCCTAACCAACCGCACTTACCAATTGATGAGGAGCTTTGGTTGATGGCTGAAGAGAGGGCCCAGGAAATACTATGTACAATTCAACCTAATGTTGTTTCTGAGGTGAACAGAAAGCAGATTATTGATTTCGTTCAGAGGCTGATTGGAGGTTACTATGGAGGAGAGGTATTTGTGTTCGGATCGGTCCCACTAAAAACCTACCTTCCTGATGGAGATATTGACTTGACAGTTCTCAGTCAAGAAAGTGTAGAGGAGGATTTAGCACAAGCAGTATGCAATCTACTTGGAAGTGGAGAAGATCTTGAATACGAAGTGAAAGACATACAGCATATACGTGCGCAGGTAAAGGTTGTAAAATGCACTGTGAAAGGTATAGCGGTTGACATCTCTTTCAACCAGATGGCTGGACTCTATGCTCTACGCTTTCTGGAGGAGGTTGACCAACTTGTCGGGAAAAACCATGTCCTCAAACGCAGTATAATCTTAGTCAAAGCTTGGTGCTATTATGAGAGCCGACTTCTTGGGGCACACCATGGCTTGCTCTCAACATATGCACTTGAAATATTAGTTTTATATATTATCAATTGTTTTCATTCATCATTGTGCGGTCCTCTAGAGGTGCTGTACAGATTTTTGGACTACTACAGCACATTTGATTGGGAGAAAAATTATATCACCATAGATGGTCCACAACCATTATCCTCCCTTCCAGAAATTGTTGAGAAACCAGAATCTGATCGAGGTGGATTGCTGATCAGTAAAGAGCTTCTGAAAAATTACAGGGATATGTGCTATGTTTCAAAGGCGTGTGAGACTTCACTCCGTGAGTTTCCCATCAAGTGCATGAACATTTTGGATCCTCTAAAAAGTGACAACAACCTAGGCCGCAGTGTCAACAAAAGTACTTTACATCGAATTGGTTACGCCTTTGCCTTCGGTGCTGAAAAGCTTAAGGAGATTCTTAACCTTCCAGGTGAAAGCATGGGTGGAGCACTAGAGGTGTTTTTCATGAACACCTTGAATAGAAATGGGAAAGGGCAAAGGCCAGATATCGACGTTCCTGTTCCTGCATTTGGTACTGGAAGATCTGAAGAACCTGTCCTTGTTGGAGATTGTGACAGTTTCTATGGTGGCTTACAACATGCTCAGATGTATCGTAACTATGCTATGCCATTTGGTGCACCTTCGAGTTCCCCACCGATGCCATTTGATGCTGATATGCTTAAGGTACAACAAAACTGGTTTAGGTTTTATCATAGAAGTACTGCATTAGTCCCTAGGCAGACATTCTTTCATCCAAATGCTCCTCCACCACCAACTTATAGCCTTGATGAAATAGGGAAATCGCGAGGAACAGGCACATACATCCCTGACATGACTCTTACTACCTACTGGAATGCCCGTGCAAGAGGATCCAGACCAAGGAGATTCGGTACCGGGAATAATAACAATAATAGTAATAGTAATACTAATGCATTGCCCAAACCATTGGAGAGAAAGGAAATAGAAGAGGTTCCTTCTGAGACTGACATGAATGATAATAGCTCCAAGTCCTTTGAGCTCTCAAATGAAGATTTTCCTCTTCTCTCAAGCATTGGCAACAGCACTTCGTTAGCATCCCAAAAATCGGAGAGAAAGGAAATAGAAGAGGTTCCTTCTGAGACTGACATGAATGAAAATAGCTCCAAGTCATTTGAGCTCTCAAATGAAGATTTTCCTCTTCTTTCAAGCATTGGCAACAGGAATTCGTCAGCATCCCAACAATCCGAGCTGCACCATAATTCCTCATCGCCTCAAATGTTTCTCGAGTTTGGAACTCGCAGCATCTCACAACCAGCGACAGAAATGAGTTTGGGAAGCAAGAGTCAGAAAGAGGATTCCAGCGCTACTACACCAGTTGTTCCAAGTCTGGCAGTGGAGACAAAAGGAAAATGTGCTCGGGTCGAAGAGAAGACGGGTTGA 2001 0.4288 MDTIQENLLASSSPNQPHLPIDEELWLMAEERAQEILCTIQPNVVSEVNRKQIIDFVQRLIGGYYGGEVFVFGSVPLKTYLPDGDIDLTVLSQESVEEDLAQAVCNLLGSGEDLEYEVKDIQHIRAQVKVVKCTVKGIAVDISFNQMAGLYALRFLEEVDQLVGKNHVLKRSIILVKAWCYYESRLLGAHHGLLSTYALEILVLYIINCFHSSLCGPLEVLYRFLDYYSTFDWEKNYITIDGPQPLSSLPEIVEKPESDRGGLLISKELLKNYRDMCYVSKACETSLREFPIKCMNILDPLKSDNNLGRSVNKSTLHRIGYAFAFGAEKLKEILNLPGESMGGALEVFFMNTLNRNGKGQRPDIDVPVPAFGTGRSEEPVLVGDCDSFYGGLQHAQMYRNYAMPFGAPSSSPPMPFDADMLKVQQNWFRFYHRSTALVPRQTFFHPNAPPPPTYSLDEIGKSRGTGTYIPDMTLTTYWNARARGSRPRRFGTGNNNNNSNSNTNALPKPLERKEIEEVPSETDMNDNSSKSFELSNEDFPLLSSIGNSTSLASQKSERKEIEEVPSETDMNENSSKSFELSNEDFPLLSSIGNRNSSASQQSELHHNSSSPQMFLEFGTRSISQPATEMSLGSKSQKEDSSATTPVVPSLAVETKGKCARVEEKTG 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03067 666 MobiDBLite consensus disorder prediction 568 648 - -
Vifa2g03067 666 MobiDBLite consensus disorder prediction 484 511 - -
Vifa2g03067 666 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 10 365 - -
Vifa2g03067 666 SUPERFAMILY Nucleotidyltransferase 14 186 IPR043519 -
Vifa2g03067 666 Gene3D Beta Polymerase, domain 2 29 171 IPR043519 -
Vifa2g03067 666 Gene3D - 212 336 - -
Vifa2g03067 666 MobiDBLite consensus disorder prediction 543 666 - -
Vifa2g03067 666 MobiDBLite consensus disorder prediction 489 507 - -
Vifa2g03067 666 CDD NT_PAP_TUTase 49 158 - -
Vifa2g03067 666 Pfam Nucleotidyltransferase domain 51 132 IPR002934 GO:0016779
Vifa2g03067 666 SUPERFAMILY PAP/OAS1 substrate-binding domain 168 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03067 Vifa-Chr2 872235687 872241214 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03067 - - gmx:100787145 724.931