Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03066 ATGCTGTTAACAATAGCTTTTTCTTCGCATTTTTCTCCTCAAATTCCGCAGTACCGCTTTCGGTGTCAATGCGGTAGTTTTGGTCCCGGAAATGGTTTTCAAACGGAACGTGGTTTAGAGTTTGATACCGGCGGCGCATTTTACCGGCGAGAGAGTGCTACTGGGAGAGACCTCGGTGTGCTTGCTGCTTCATTGCAGAAAAAGGATAGTGGAAGCTTGCGTGTTCTTGATGCTCTTTGTGGTTGTGGAATTCGGTCGTTGAGGTATTTGAAGGAATCTGAAGCTGATTTTGTTGCTGCTAATGATGGAAATGAGTGTTATGGGAGTATCATTGTGGAGAATTTGAATAGGGTTTGTGCGGAAGAGGAGAAGAGATGGGTGGTTAGTCATTTGGAAGCTAATAGAGTTATGACTGAGTATTATCTTCAGAAGAGTTTGTTTGATTTTATTGATGTCGATTCTTTTGGAAGTGATTCTTCTTTCTTGAGGTCTGCTATCAATTGTTTGAAATTTGGGGGGCTGCTTTATGTCACTTCCACGGATGGATTCTCTTCTGGTGGCCACCGTCCTCATCATTCCTTAGCTGCTTATGGAGCGTATGTGCGTCCGATGCCGTATTCGAACGAGATTGGTTTGCGAATGCTTATAGGTGGGGTTGTTCGGGAGGCTGCTGTGTTGGGGTACCATGTAACTCCGTTGTTTTCGTACTATGCTTATCACGGACCTGTTTTCCGAGTTTTGCTCAGGTTGAATCGTGGGAAGGTTCATGATAGTAGACATTATGGTTTTATAGGCCATTGCCACCAGTGTGGAAATTCCAATGAATTTTCTTGGGACCAACTTGGTCAGTTCAGTTGCTCCTGCAGTGTGTCAAAGGTTTCAAACTCCCTCAAGGTATCAGGACCTCTTTGGACAGGGCCTCTCCATGATGCGGCGTATCTTACAGACATGTTAGATCTGGCCAAGCAGTGGGGATGGATTGGCTGTGATGGCAAAGACAGTCTTGAAAAGCTTATAAACTTGATGGTGGATGAAAGTGACCCCAGGTTGCCATCTGGGTATATAAAGTTGGATGAGATGGCAAGCCGTGCGAAAATCAATACTCCGCCTCTGAGGAGCTTGATGAGCGCCATACATGAGAAAGGTTATGCTGCCAGCAGGTCTCACATAATCACAAATGCAATTAAAACAAATTGCCCCATGACGGAATTCATTAGTATAGCCAAAGAACTACTGCCGGTATCTGTCTCTTAA 1254 0.4482 MLLTIAFSSHFSPQIPQYRFRCQCGSFGPGNGFQTERGLEFDTGGAFYRRESATGRDLGVLAASLQKKDSGSLRVLDALCGCGIRSLRYLKESEADFVAANDGNECYGSIIVENLNRVCAEEEKRWVVSHLEANRVMTEYYLQKSLFDFIDVDSFGSDSSFLRSAINCLKFGGLLYVTSTDGFSSGGHRPHHSLAAYGAYVRPMPYSNEIGLRMLIGGVVREAAVLGYHVTPLFSYYAYHGPVFRVLLRLNRGKVHDSRHYGFIGHCHQCGNSNEFSWDQLGQFSCSCSVSKVSNSLKVSGPLWTGPLHDAAYLTDMLDLAKQWGWIGCDGKDSLEKLINLMVDESDPRLPSGYIKLDEMASRAKINTPPLRSLMSAIHEKGYAASRSHIITNAIKTNCPMTEFISIAKELLPVSVS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03066 417 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 35 409 IPR029063 -
Vifa2g03066 417 Pfam N2,N2-dimethylguanosine tRNA methyltransferase 46 407 IPR002905 GO:0003723|GO:0004809|GO:0008033
Vifa2g03066 417 Gene3D - 353 411 IPR042296 -
Vifa2g03066 417 Gene3D Vaccinia Virus protein VP39 32 347 IPR029063 -
Vifa2g03066 417 ProSiteProfiles Trm1 methyltransferase domain profile. 32 408 IPR002905 GO:0003723|GO:0004809|GO:0008033
Vifa2g03066 417 FunFam tRNA (guanine(26)-N(2))-dimethyltransferase 29 347 - -
Vifa2g03066 417 FunFam tRNA (guanine(26)-N(2))-dimethyltransferase 351 410 - -
Vifa2g03066 417 PANTHER N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE 36 409 IPR002905 GO:0003723|GO:0004809|GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03066 Vifa-Chr2 872231176 872234214 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03066 K00555 - gmx:100788340 655.595