Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02978 ATGGGTTCCGCTGAAAATGAAGAATCAGCAACCCAAATATCCGAAACCACAAAAAGTTCATCTCTTTTCCGATACAATTCACCTCTTGCACAAATCATTCTCATTGGGTTAGTTTGTTTTTGTTGTCCAGGCATGTTCAACGCTCTCTCGGGAATGGGCGGTGGTGGTCAAGTCAACGCCACCGCTTCCAACAACGCCCTCACCGCACTCTACACAACCTTCGCCGTTTTCGGAATCCTAGGTGGTGGAATCTACAACATCCTCGGACCACACTTAACTCTCTTCGCAGGTTGTTCCACCTATGTCCTCTACGCCGGTTCCTTCCTCTACTACAATCATAAACAACACCAAGCTTTTGCTATAATCGCCGGTGCCGTTCTTGGAATCGGTGCAGGGTTATTATGGGCTGCACAAGGTGCTATTATGACATCTTACCCTCCAGTGAATCGGAAAGGAACTTACATTTCGATTTTCTGGAGTATCTTCAACATGGGTGGCGTTATCGGTGGTTTAATCCCTTTTATTCTTAATTATAACAGTGGTGATAAAGCTGCTACTGTTAACGATGGAACTTACATAGGTTTCATGGCTTTTATGTCCTTAGGAACCGTTTTGTCTCTGACTATTTTGCCAGCGAGTAAAGTTGTTCGTGATGATGGAACAAAGTGTACAAATATGTTATACTCAAACGTTGCAACTGAGATTATGGAGATTTTGAAACTGTTCTACAATTGGAAGATGCTTCTCATGATTCCTGCAGCTTGGTCTAGTAATTTTTTCTATACATATCAGTTTAATCATGTTAATAAGACCGAGTTTAATTTGCGAACAAGAGGGTTGAACAATGTGTTTTATTGGGGAGCACAGATGATCGGTTCGATTGGGATCGGATACACTATGGATTTCAGTTTTAAGAGTAGGAAGAAAAGAGGGATTGTAGGAATCTGTGTTGTTGCTGTTCTTGGAAGTGCTATCTGGGGTGGTGCAGTGGCTAATCAGATAAAACATAGACATGGTGTGATATTGGATTTTAAGGAGTCTGGTTCTGGTTTTGCTGGTCCTTTTGTTTTGTATTTTAGTTTTGGATTGTTGGATGCCATGTTTCAGAGTATGGTTTATTGGTCCATTGGAGCATTGGCTAATGATTCTGAGATTCTTAGCAGATATACAGGGTTCTATAAAGGGATACAGAGTGCTGGAGCTGCGGTTGCATGGCAAATTGATAACCACAATGTGTCTCCAATGTCACAGTTGATTGTGAATTGGGTGCTCACTACATTAAGCTATCCGTTACTGTTAGTTTTGATGGTGTTGGCTGTGAAGGAGGATAGTAAGGAGGAAGAGAAAACTGGTGAAAAGAAGGAGGATAGTAAGGAGGAAGAGAAAACTGGTGAAAAGATTTCTGCTCCAGGTCACAATGGCTCTCTCTCTCTGTCCATTGACTTCTCTTGTTGTCCCTTTCAATTGTAA 1470 0.4177 MGSAENEESATQISETTKSSSLFRYNSPLAQIILIGLVCFCCPGMFNALSGMGGGGQVNATASNNALTALYTTFAVFGILGGGIYNILGPHLTLFAGCSTYVLYAGSFLYYNHKQHQAFAIIAGAVLGIGAGLLWAAQGAIMTSYPPVNRKGTYISIFWSIFNMGGVIGGLIPFILNYNSGDKAATVNDGTYIGFMAFMSLGTVLSLTILPASKVVRDDGTKCTNMLYSNVATEIMEILKLFYNWKMLLMIPAAWSSNFFYTYQFNHVNKTEFNLRTRGLNNVFYWGAQMIGSIGIGYTMDFSFKSRKKRGIVGICVVAVLGSAIWGGAVANQIKHRHGVILDFKESGSGFAGPFVLYFSFGLLDAMFQSMVYWSIGALANDSEILSRYTGFYKGIQSAGAAVAWQIDNHNVSPMSQLIVNWVLTTLSYPLLLVLMVLAVKEDSKEEEKTGEKKEDSKEEEKTGEKISAPGHNGSLSLSIDFSCCPFQL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02978 489 Pfam Ion channel regulatory protein UNC-93 56 255 IPR010291 -
Vifa2g02978 489 Gene3D MFS general substrate transporter like domains 27 443 IPR036259 -
Vifa2g02978 489 MobiDBLite consensus disorder prediction 445 480 - -
Vifa2g02978 489 CDD MFS_unc93-like 30 430 - -
Vifa2g02978 489 PANTHER ET TRANSLATION PRODUCT-RELATED 29 448 - -
Vifa2g02978 489 SUPERFAMILY MFS general substrate transporter 34 447 IPR036259 -
Vifa2g02978 489 MobiDBLite consensus disorder prediction 445 467 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02978 - - tpra:123917871 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02978 2 850831781 850833383 Vifa2g02978 2 850831781 850833383 ECH