Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02969 ATGTTTTCTTCTGTTGAGGGAACTGTGAAGCTTCTTTTCCAACCTGCAGAGGAGGGAGCTAAAGGTGCCTCACAAATGATAAAAGAAGGAGTTCTTCAAGACGTTGAAGCAATTTTTGCTCTTCATATTGATGCTATGATATCTACCGGAGCCATAGCATCGATTCCAGGTCCTTTTACAGCTGCTGGATGTATTTTTGAAGCAAAGATTGTAGGAGTAGGTGGTCACGCTGCACTCCCGCACATGACTGTAGATCCAGTGCTGGCTACATCATTTGCAATATTGGCCCTGCAACAGCTTGTCTCAAGGGAAATTGATCCTCTTCACAGTCAAGTGCTGTCTATTACTTATGTCAAAGACGCATTAAACGTGATCCCGTCCTATGTTATTGAAGGACAAGCAAGTGTACATCGATGTAAAGCATATGTTGATTTCATGGAAAAAGACCATACACCATATCCTTCTGTTGTCAACGACAAAGTCTTACATCTACATGTCGATAGAGTTGGCAGACTTCTGCTTGGTACAGGCAATGTCCATGAAGCAAAGAAGTTGATGGCAGGTGAAGATTTTGCGTTTTATCAAGAAGTGATTCCTGGAACATTGTTTTCAATTGGAATCAGAAATGAGAAAGCAGGATCATTTCACTCCCCACACTCTCCATTTTTCTTTCTTGATGAGGAAGTTCTTTCAATCGGAGCAGCTCTGCACACTGCTGTCGCTGAGTTGTATTTAAGTGAGCATAGTTTTTAG 753 0.4183 MFSSVEGTVKLLFQPAEEGAKGASQMIKEGVLQDVEAIFALHIDAMISTGAIASIPGPFTAAGCIFEAKIVGVGGHAALPHMTVDPVLATSFAILALQQLVSREIDPLHSQVLSITYVKDALNVIPSYVIEGQASVHRCKAYVDFMEKDHTPYPSVVNDKVLHLHVDRVGRLLLGTGNVHEAKKLMAGEDFAFYQEVIPGTLFSIGIRNEKAGSFHSPHSPFFFLDEEVLSIGAALHTAVAELYLSEHSF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02969 250 PANTHER PEPTIDASE M20 FAMILY MEMBER 5 129 IPR017439 GO:0016787
Vifa2g02969 250 Pfam Peptidase family M20/M25/M40 6 240 IPR002933 GO:0016787
Vifa2g02969 250 Gene3D Zn peptidases 130 250 - -
Vifa2g02969 250 Gene3D - 61 129 - -
Vifa2g02969 250 SUPERFAMILY Zn-dependent exopeptidases 5 246 - -
Vifa2g02969 250 Gene3D Zn peptidases 4 60 - -
Vifa2g02969 250 SUPERFAMILY Bacterial exopeptidase dimerisation domain 61 130 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02969 Vifa-Chr2 848290085 848291301 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02969 K14664 - gmx:100777587 372.859