Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02957 ATGTCTGTAATTACAATACAATCTCCAAAACATTGTGCAACAAAACAAGTACTAAAAATAGAAAGAAACTACAAGAAAATCTTGTTTGCTTTCTCAACATTTTTCACCACAATCCTCTTACTCATACTCCTCATCTACTTCATCCTCAAGCCATCAAAACCTCAATTCTCCCTCCAAGAGCTTGACATCTATCAACTAAACCTCACCGGACCAATCCTCAACTCATCAATCCAACTCACTCTCCTCTCAAAAAATCCAAACCAGAAAGTTAGCATTTACTACGACGAGTTTCAAGTCTATGCCACTTACAAGAATCAACAAATAACTACTGACTCATTTCTGCCACCCTTTTACCAAGGACAACAAGAGACTAATCTTCTCTCATCTTCTTTGATAGGAAATGCTTTACCTGTTGCTCCTTCCATTGGTTATCAAATGGGCCATGATCAAGCTTCTGGAAGATTGGTTTTGAACCTTAAAGTTAATGGAAAACTTCGTTGGAAAATTGGAACATGGGTTTCTGGTCGTTACAGGTTTAACGTTAACTGTGTTTCTGTTACGGCTTTTGGAATTGGAACCTCTATGAATGTGCCACTGCCTCCTATGACTTCTCAGTGTTCTACCATAATATAA 633 0.3791 MSVITIQSPKHCATKQVLKIERNYKKILFAFSTFFTTILLLILLIYFILKPSKPQFSLQELDIYQLNLTGPILNSSIQLTLLSKNPNQKVSIYYDEFQVYATYKNQQITTDSFLPPFYQGQQETNLLSSSLIGNALPVAPSIGYQMGHDQASGRLVLNLKVNGKLRWKIGTWVSGRYRFNVNCVSVTAFGIGTSMNVPLPPMTSQCSTII 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02957 210 PANTHER OS05G0367900 PROTEIN 24 207 IPR044839 GO:0098542
Vifa2g02957 210 Pfam Late embryogenesis abundant protein 80 183 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02957 Vifa-Chr2 843938979 843939611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02957 27 183 EF-hand Containing Proteins AT5G21130 19.876 2.21e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02957 - - gmx:100783857 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02957 2 843938979 843939611 Vifa2g02957 2 843938979 843939611 ECH