Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02936 ATGGCTCAGGCAGTGTCATTGTCAACAATTGCTTCACCTATTCTGTCCCAAAAACCAGCGAACTCTGTCAAAACACCACCTTACATGGCCTCATTTCCTTTAAGGAGGCAATTGCCGAGGCTAGGACTGAGAAATGTGAGAGCTCAGGCCGGTGGTGGTGATAACAAAGATAACTCCGTGGAAGTTCATCGTGTTAACAAAGACGATCAAGGGACTGCTGTAGAAAGAAAGCCTCGCAGAAGTTCCATGGACATTTCACCCTTTGGTTTATTGGACCCATGGTCACCTATGAGAAGCATGCGTCAAATGCTAGACACAATGGACAGACTTTTCGAAGATGCAATGACGATTCCTGGAAGAAGTAACATTGGAGGAGGTGAGTTACGCGTCCCTTGGGAAATCAAAGATGAAGAACATGAAATCAGAATGCGTTTTGATATGCCTGGTATTTCTAAGGAAGATGTTAAGGTATCAGTGGAAGATGATGTTCTTGTGATAAAAAGTGATCACAAAGAGGAAAGTGGTGGAGAAGATTCTTGGTCAAGAAAGAGTTATAGTTCTTATAATACTCGTCTCAAGCTTCCTGATAACTGTGAGAAAGATAAGGTTAAAGCTGAGTTGAAAGATGGTGTGCTTTATATTAGTATTCCTAAGACTAAAGTTGAACGCAAGGTTATTGATGTTCAAATTCACTGA 696 0.4152 MAQAVSLSTIASPILSQKPANSVKTPPYMASFPLRRQLPRLGLRNVRAQAGGGDNKDNSVEVHRVNKDDQGTAVERKPRRSSMDISPFGLLDPWSPMRSMRQMLDTMDRLFEDAMTIPGRSNIGGGELRVPWEIKDEEHEIRMRFDMPGISKEDVKVSVEDDVLVIKSDHKEESGGEDSWSRKSYSSYNTRLKLPDNCEKDKVKAELKDGVLYISIPKTKVERKVIDVQIH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02936 231 CDD ACD_sHsps-like 133 218 - -
Vifa2g02936 231 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 123 231 IPR002068 -
Vifa2g02936 231 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 230 IPR044587 GO:0009408
Vifa2g02936 231 Pfam Hsp20/alpha crystallin family 133 231 IPR002068 -
Vifa2g02936 231 FunFam 26.5 kDa heat shock protein, mitochondrial 89 230 - -
Vifa2g02936 231 Gene3D - 90 230 IPR008978 -
Vifa2g02936 231 SUPERFAMILY HSP20-like chaperones 98 229 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02936 Vifa-Chr2 834302301 834302996 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02936 K13993 - gmx:548078 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02936 2 834302301 834302996 Vifa2g02936 2 834302301 834302996 ECH