Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02871 ATGGCAAACATTTCAATTCCACTCCCACGAACCGGTCTGTTGTCCATACGCAACTGCTCAACCAAACGCCCGTCTTTCGCCACTTCAGCTTCACCTTTCAGAATTACTTGTTCTGTTGTGAGAGAAGGTGAGTTAGATGGATCTGAAAATAAAGCGAGGTTGTTTAGTTTTAATACAATCAAGGGCGTTGCTTGTGGTATTCTTGCAGCTTACACTGTTACTTCTGCTTCGTTTCCTGTTATTGCTGCTACTCAGAGGTTGCCCCCATTGTCAACTGAGCCCAATCGTTGCGAGCGGGCATTCGTCGGCAACACAATTGGTCAGGCAAACGGTGTGTACGACAAACCATTAGATCTTCGGAAATGTGACTTCACAAATGAAAAATCCAACCTAAAGGGGAAGACACTGTCTGCAGCACTAATGTCAGATGCCAAGTTCGATGGTGCTGACATGACAGAAGTTGTAATGTCCAAGGCTTACGCTGTTGGGGGCAGCTTCAAAGGTGTGGACTTCTCAAATGCAGTGTTGGACCGTGTTAATTTCGGGAAAGCTGATCTCCAAGGAGCTGTATTTAGGAACACAGTTTTGTCCGGCTCGACCTTTGACGAGGCTAAGCTGGAAGGTGCTGTTTTTGAGGACACTATCATTGGTTACATTGATCTCCAAAAGATATGCAGAAATACGAGCATCAACGAGGAGGGAAGAGCGGAATTAGGGTGTCGATGA 726 0.4601 MANISIPLPRTGLLSIRNCSTKRPSFATSASPFRITCSVVREGELDGSENKARLFSFNTIKGVACGILAAYTVTSASFPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRKCDFTNEKSNLKGKTLSAALMSDAKFDGADMTEVVMSKAYAVGGSFKGVDFSNAVLDRVNFGKADLQGAVFRNTVLSGSTFDEAKLEGAVFEDTIIGYIDLQKICRNTSINEEGRAELGCR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02871 241 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 6 241 IPR044195 -
Vifa2g02871 241 SUPERFAMILY Pentapeptide repeat-like 117 222 - -
Vifa2g02871 241 Pfam Pentapeptide repeats (8 copies) 136 173 IPR001646 -
Vifa2g02871 241 Pfam Pentapeptide repeats (8 copies) 176 213 IPR001646 -
Vifa2g02871 241 Gene3D - 115 241 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02871 - - aprc:113846743 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02871 2 813468595 813470592 Vifa2g02871 2 813468595 813470592 ECH