Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02865 ATGTCGATGGAAGTTACTCAGGCACTTTTGAATGCTCAATCAATTGATGGAACTGTACGTAAGCATGCTGAGGAAAGTTTGCGGCAATTTCAGGAGCAAAACCTTCCTGGTTTCTTGGTCTCTCTTTCTGGAGAGTTAGCAAATGAAGAAAAACCAGTTGATAGTCGCAAGTTGGCAGGTTTGATACTTAAAAATGCATTGGATGCCAAGGATGAAAACAGAAAACGGGAATTGGTTCAGAGATGGTTGTCTTTGGAGACCGCAGCAAAGGCTCAGGTTAAGGCATGCTTGCTACAAACACTCTCTTCTCTTGTAGTTGATGCTCGGTCAACAGCAACTCAAGTTGTTGCTAAAATTGCTGGAATTGAGCTTCCACATAAACAGTGGCCTGAGCTGATAGGATCACTTTTATCAAATATTCATCAAGTTCCTGCTCATGTGAAGCAAGCAACTTTGGAGACTCTGGGGTATTTGTGTGAGGAAGTCTCTCACGAGGTTGTTGAACAAGACCAAGTAAATAAAATTCTTACTGCTGTAGTTCAAGGTATGAATTCATCTGAAAAGAACAATGATGTCAGACTTGCTGCTACTAGGGCATTATATAATGCTCTTGGATTTGCACAGGCTAATTTTAGCAATGATATGGAGCGTGAATATATCATGAGAGTTGTTTGTGAGACAACTATGTCTCCTGAAGTGAAAATACGACAGGCAGCTTTTGAATGTTTGGTCTCAATTGCGGCCATGTATTATGTAAAATTGGCTCCTTACATCCAGGATATATATAACATCACAGCAAAGGCTGTTAGGGGTGATCAGGAGCCTGTTGCTCTCCAGGCCATTGAATTCTGGAGTACGGTTTGTGATGAGGAGACTGATATCTTGGAAGAATATGTGGGCGATACCACTGGGGATTCTGATTTACCTTGTTTTTATTTCATTAAGCAAGCCCTTCCCGCACTCATTCCTCTGCTGTTGGAAACGTTACTCAAACAAGAAGAGGATCAAGATCTGGATGAAGGTGCATGGAATATTGCAATGGCAGGTGGTACATGCCTTGGTTTAGTTGCTCGCACTACTGGAGATGATATTGTGCCACTGGTAATGCCCTTCATCGAGGAGAATATTACCAAACCTGATTGGAGACAGAGGGAAGCAGCCACATATGCGTTTGGCTCTATCTTGGAGGGCCCTTCTCCAGACAAACTCATACCCCTTGTTAATCATGCTTTACCTTTTATGCTCAGTGCTTTAGTAAAGGATCCGAGCAACCATGTTAAAGACACCACTGCTTGGACTTTGGGACGAATGTTTGAATTTCTTCACAGTTCAATTGTTGGCACACCAATTATTAATGAGGGAAATGCCCAACAGATTATTACAGTTCTCCTTCAAAGCATGAAGGATGTCCCTAATGTTGCCGAGAAAGCCTGTGGAGCCCTGTATTTTCTTGCCCAGGGTTACGAGGACGTGGGACAAACATCTCCCATTACTCCCTTTTTCCAGGAAATTGTTCAAGCACTTCTCACTGTTACCCACAGAGAGGATGCTACAGAATCTCGATTAAGAGCGTCAGCATACGAAACATTGAATGAAGTAGTAAGGTGTTCAACAGGTGAAACAGCTCCTTTGGTTTTACAACTAGTTTCTGTCATCATGATGGAGCTACACAAATGTCTTGAAGCACAAAATCTTTCATCTGATGAAAGAGAAAAACAGAGTGAACTTATAGGTCTTCTTTGTGGATGCTTGCAAGTGATTATTCAGAAGCTAGGGTCTTCAGAACCTACCAAATATGTTTTCTTGCAGTATGCTGATCAGATAATGGGACTATTCATCAGGGTTTTTGCTTGTAGAAATGCCACTGCACACGAGGAGGCCATGCTAGCTATTGGAGCCCTTGCCTATGCAATAGGCCCTGATTTTGCTAAATACCTGCCAGAATTTTACCAGTTTCTGGAGATGGACCTTCAGAATTTTGAGGAGTACCAAGTTTGTGCTGTAACTGTTGGTGTAGTAGGCGACATATGCAGAGCATTGGAGGATAAAATACTGCCTTACTGTGACGGGATTATGACACAACTTCTCAGAAATTTGTCAAGTGATAACTTGCACCGTTCTGTAAAGCCGCCATTATTTTCATGCATTGGTGATATAGCACTTGCTATAGGAGACAACTTCAATAAGTACTTAATGTATGCAATGAACACACTACAAATTGCTGCGGAGACTTACGCCCACACATCTGCCTTTGACTTGGAAATGACAGAGTACATCAACTCTCTGAGAAATGGGATATTAGAGGCATATTCTGGGATCTTCCAAGGTTTTAAGAATTCATCAAAAACCCAGCTCTTGATTCCTTATGCTCCTCACATCCTCCAGTTCTTGGATAGCATATACATGGAAAAAGACATGGATGATGTGGTTATGAAAACAGCCATTGGAGTCCTTGGAGATCTAGCTGATACACTTGGAAGCAATGCTGGTTCTTTAATTCAACAGTCTTTGTCAAGCAGAGATTTCTTAAATGAATGTTTGACCTCAGATGACCATATGATTAAAGAGTCTGCTGAATGGGCCAAGTTGGCTATCAATCGTGCTATATCTGTTTGA 2616 0.4174 MSMEVTQALLNAQSIDGTVRKHAEESLRQFQEQNLPGFLVSLSGELANEEKPVDSRKLAGLILKNALDAKDENRKRELVQRWLSLETAAKAQVKACLLQTLSSLVVDARSTATQVVAKIAGIELPHKQWPELIGSLLSNIHQVPAHVKQATLETLGYLCEEVSHEVVEQDQVNKILTAVVQGMNSSEKNNDVRLAATRALYNALGFAQANFSNDMEREYIMRVVCETTMSPEVKIRQAAFECLVSIAAMYYVKLAPYIQDIYNITAKAVRGDQEPVALQAIEFWSTVCDEETDILEEYVGDTTGDSDLPCFYFIKQALPALIPLLLETLLKQEEDQDLDEGAWNIAMAGGTCLGLVARTTGDDIVPLVMPFIEENITKPDWRQREAATYAFGSILEGPSPDKLIPLVNHALPFMLSALVKDPSNHVKDTTAWTLGRMFEFLHSSIVGTPIINEGNAQQIITVLLQSMKDVPNVAEKACGALYFLAQGYEDVGQTSPITPFFQEIVQALLTVTHREDATESRLRASAYETLNEVVRCSTGETAPLVLQLVSVIMMELHKCLEAQNLSSDEREKQSELIGLLCGCLQVIIQKLGSSEPTKYVFLQYADQIMGLFIRVFACRNATAHEEAMLAIGALAYAIGPDFAKYLPEFYQFLEMDLQNFEEYQVCAVTVGVVGDICRALEDKILPYCDGIMTQLLRNLSSDNLHRSVKPPLFSCIGDIALAIGDNFNKYLMYAMNTLQIAAETYAHTSAFDLEMTEYINSLRNGILEAYSGIFQGFKNSSKTQLLIPYAPHILQFLDSIYMEKDMDDVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSRDFLNECLTSDDHMIKESAEWAKLAINRAISV 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02865 871 ProSiteProfiles Importin-beta N-terminal domain profile. 23 103 IPR001494 GO:0006886|GO:0031267
Vifa2g02865 871 PANTHER IMPORTIN BETA 6 844 IPR040122 GO:0006606
Vifa2g02865 871 SMART IBN_N_2 23 103 IPR001494 GO:0006886|GO:0031267
Vifa2g02865 871 Pfam Importin-beta N-terminal domain 23 102 IPR001494 GO:0006886|GO:0031267
Vifa2g02865 871 FunFam Importin subunit beta-1 3 871 - -
Vifa2g02865 871 Gene3D - 1 871 IPR011989 -
Vifa2g02865 871 SUPERFAMILY ARM repeat 3 861 IPR016024 -
Vifa2g02865 871 Pfam HEAT-like repeat 381 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02865 Vifa-Chr2 813099278 813101979 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02865 K14293 - gmx:100785130 1554.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02865 2 813099278 813101979 Vifa2g02865 2 813099278 813101979 ECH